(Q33850285)

29 July 2017

title

Network based transcription factor analysis of regenerating axolotl limbs (English)

1 reference

29 July 2017

Deepali Jhamb

1

1 reference

29 July 2017

Nandini Rao

2

1 reference

29 July 2017

Derek J Milner

3

1 reference

29 July 2017

Fengyu Song

4

1 reference

29 July 2017

Jo Ann Cameron

5

1 reference

29 July 2017

David L Stocum

6

1 reference

29 July 2017

Mathew J Palakal

7

1 reference

29 July 2017

publication date

18 March 2011

1 reference

29 July 2017

1 reference

29 July 2017

volume

12

1 reference

29 July 2017

page(s)

80

1 reference

describes a project that uses

29 July 2017

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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Proteomics analysis of regenerating amphibian limbs: changes during the onset of regeneration

28 July 2018

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Expression of stem cell pluripotency factors during regeneration in newts.

28 July 2018

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Sp1 phosphorylation and its regulation of gene transcription.

28 July 2018

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Microarray and cDNA sequence analysis of transcription during nerve-dependent limb regeneration

28 July 2018

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Wnt signaling controls the fate of mesenchymal stem cells

28 July 2018

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

28 July 2018

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28 July 2018

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Why myc? An unexpected ingredient in the stem cell cocktail

28 July 2018

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Sp1: emerging roles--beyond constitutive activation of TATA-less housekeeping genes

28 July 2018

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Transforming growth factor: beta signaling is essential for limb regeneration in axolotls

28 July 2018

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28 July 2018

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Genetics. Getting closer to the whole picture.

28 July 2018

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Wnt/beta-catenin signaling regulates vertebrate limb regeneration

28 July 2018

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28 July 2018

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Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors

28 July 2018

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Salamander limb regeneration involves the activation of a multipotent skeletal muscle satellite cell population

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Sp transcription factor family and its role in cancer

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

TGF-beta and epithelial-to-mesenchymal transitions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Proximodistal identity during vertebrate limb regeneration is regulated by Meis homeodomain proteins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Molecular pathogenesis of chronic wounds: the role of beta-catenin and c-myc in the inhibition of epithelialization and wound healing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Duel nature of TGF-beta signaling: tumor suppressor vs. tumor promoter

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

From biomedicine to natural history research: EST resources for ambystomatid salamanders

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Cytoscape: a software environment for integrated models of biomolecular interaction networks

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Mechanisms of TGF-beta signaling from cell membrane to the nucleus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

DAVID: Database for Annotation, Visualization, and Integrated Discovery

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Identification of genes expressed during Xenopus laevis limb regeneration by using subtractive hybridization

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Regeneration of the urodele limb: a review

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Vertebrate limb regeneration and the origin of limb stem cells.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Identification and characterization of newt rad (ras associated with diabetes), a gene specifically expressed in regenerating limb muscle

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Role of Smad proteins and transcription factor Sp1 in p21(Waf1/Cip1) regulation by transforming growth factor-beta.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Apical epithelial cap morphology and fibronectin gene expression in regenerating axolotl limbs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Expression of Mmp-9 and related matrix metalloproteinase genes during axolotl limb regeneration

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Molecular cloning of the Notophthalmus viridescens radical fringe cDNA and characterization of its expression during forelimb development and adult forelimb regeneration

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Examination of fibronectin distribution and its sources in the regenerating newt limb by immunocytochemistry and in situ hybridization

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Expression and activity of the newt Msx-1 gene in relation to limb regeneration.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Regulation of HoxA expression in developing and regenerating axolotl limbs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Position dependent expression of a homeobox gene transcript in relation to amphibian limb regeneration

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Identification and expression of a regeneration-specific homeobox gene in the newt limb blastema

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Stretching the limits: stem cells in regeneration science

28 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-80

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-80

Expression of Msx genes in regenerating and developing limbs of axolotl.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-80

Quantitative evaluation of morpholino-mediated protein knockdown of GFP, MSX1, and PAX7 during tail regeneration in Ambystoma mexicanum

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-80

TGF-beta signaling is required for multiple processes during Xenopus tail regeneration

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-80

Transforming growth factor beta-mediated transcriptional repression of c-myc is dependent on direct binding of Smad3 to a novel repressive Smad binding element

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-80

Signal maps for mass spectrometry-based comparative proteomics.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

The limb identity gene Tbx5 promotes limb initiation by interacting with Wnt2b and Fgf10.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Modulation of gelatinase activity correlates with the dedifferentiation profile of regenerating salamander limbs.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

Analysis of Hox-4.5 and Hox-3.6 expression during newt limb regeneration: differential regulation of paralogous Hox genes suggest different roles for members of different Hox clusters

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3240668

The regeneration of accessory limb parts following epidermal cap transplantation in urodeles

29 October 2018

1 reference

12 December 2020

Expression of Hox A11 in the limb and the regeneration blastema of adult newt

1 reference

12 December 2020

Influence of an eccentric epidermal cap on limb regeneration in Amblystoma larvae

1 reference

12 December 2020

Cytoscape: a community-based framework for network modeling

1 reference

12 December 2020

Global analysis of gene expression in Xenopus hindlimbs during stage-dependent complete and incomplete regeneration

1 reference

12 December 2020

Snail is required for transforming growth factor-beta-induced epithelial-mesenchymal transition by activating PI3 kinase/Akt signal pathway

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2105-12-80

1 reference

journals/bmcbi/JhambRMSCSP11

29 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

29 July 2017

1 reference