(Q33881163)

29 July 2017

title

The genomic landscape of the Ewing Sarcoma family of tumors reveals recurrent STAG2 mutation (English)

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29 July 2017

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Antonio Llombart-Bosch

24

Antonio Llombart-Bosch

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29 July 2017

Sivasish Sindiri

6

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Andrew S Brohl

Andrew S Brohl

1

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Piero Picci

Piero Picci

18

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Markku Miettinen

21

Markku Miettinen

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29 July 2017

David A Solomon

2

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29 July 2017

Wendy Chang

3

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29 July 2017

Jianjun Wang

4

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29 July 2017

Young Song

5

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29 July 2017

Rajesh Patidar

7

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29 July 2017

Laura Hurd

8

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29 July 2017

Li Chen

9

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29 July 2017

Jack F Shern

10

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29 July 2017

Hongling Liao

11

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29 July 2017

Xinyu Wen

12

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29 July 2017

Julia Gerard

13

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29 July 2017

Jung-Sik Kim

14

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29 July 2017

Jose Antonio Lopez Guerrero

15

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29 July 2017

Isidro Machado

16

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29 July 2017

Daniel H Wai

17

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29 July 2017

Timothy Triche

19

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29 July 2017

Andrew E Horvai

20

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29 July 2017

Jun S Wei

22

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29 July 2017

Daniel Catchpool

23

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29 July 2017

Todd Waldman

25

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29 July 2017

Javed Khan

26

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29 July 2017

publication date

10 July 2014

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29 July 2017

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29 July 2017

volume

10

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29 July 2017

issue

7

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29 July 2017

page(s)

e1004475

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Creative Commons CC0 License

29 July 2017

copyright license

start time

10 July 2014

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April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

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describes a project that uses

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Comprehensive genomic analysis of rhabdomyosarcoma reveals a landscape of alterations affecting a common genetic axis in fusion-positive and fusion-negative tumors

1 reference

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Targeting oxidative stress in embryonal rhabdomyosarcoma.

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ETV6-NTRK3 is a common chromosomal rearrangement in radiation-associated thyroid cancer

5 July 2018

1 reference

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Recurrent inactivation of STAG2 in bladder cancer is not associated with aneuploidy.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Frequent truncating mutations of STAG2 in bladder cancer

5 July 2018

1 reference

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Recurrent mutations in multiple components of the cohesin complex in myeloid neoplasms

5 July 2018

1 reference

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5 July 2018

1 reference

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Clonal diversity of recurrently mutated genes in myelodysplastic syndromes.

5 July 2018

1 reference

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High-resolution genomic analysis suggests the absence of recurrent genomic alterations other than SMARCB1 aberrations in atypical teratoid/rhabdoid tumors

5 July 2018

1 reference

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A remarkably simple genome underlies highly malignant pediatric rhabdoid cancers

5 July 2018

1 reference

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Systematic identification of genomic markers of drug sensitivity in cancer cells

5 July 2018

1 reference

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Synthetic lethality of cohesins with PARPs and replication fork mediators

5 July 2018

1 reference

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Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes

5 July 2018

1 reference

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A novel retinoblastoma therapy from genomic and epigenetic analyses

5 July 2018

1 reference

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High prevalence of CIC fusion with double-homeobox (DUX4) transcription factors in EWSR1-negative undifferentiated small blue round cell sarcomas.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Promiscuous partnerships in Ewing's sarcoma

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Mutational inactivation of STAG2 causes aneuploidy in human cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

TopHat-Fusion: an algorithm for discovery of novel fusion transcripts

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

deFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Diverse somatic mutation patterns and pathway alterations in human cancers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Mammary analogue secretory carcinoma of salivary glands, containing the ETV6-NTRK3 fusion gene: a hitherto undescribed salivary gland tumor entity.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Cohesin promotes the repair of ionizing radiation-induced DNA double-strand breaks in replicated chromatin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Human genome sequencing using unchained base reads on self-assembling DNA nanoarrays

5 July 2018

1 reference

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Circos: an information aesthetic for comparative genomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

The NFATc2 gene is involved in a novel cloned translocation in a Ewing sarcoma variant that couples its function in immunology to oncology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Combined use of expression and CGH arrays pinpoints novel candidate genes in Ewing sarcoma family of tumors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Sequence variant classification and reporting: recommendations for improving the interpretation of cancer susceptibility genetic test results

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Changes in incidence and survival of Ewing sarcoma patients over the past 3 decades: Surveillance Epidemiology and End Results data.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Chromosome 9p21 gene copy number and prognostic significance of p16 in ESFT.

5 July 2018

1 reference

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Diagnosis of the small round blue cell tumors using multiplex polymerase chain reaction

5 July 2018

1 reference

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Variants in the GH-IGF axis confer susceptibility to lung cancer

5 July 2018

1 reference

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Survival after recurrence of Ewing's sarcoma family of tumors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Expression of the ETV6-NTRK3 gene fusion as a primary event in human secretory breast carcinoma

5 July 2018

1 reference

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Congenital mesoblastic nephroma t(12;15) is associated with ETV6-NTRK3 gene fusion: cytogenetic and molecular relationship to congenital (infantile) fibrosarcoma

5 July 2018

1 reference

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A novel ETV6-NTRK3 gene fusion in congenital fibrosarcoma

5 July 2018

1 reference

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Among genes involved in the RB dependent cell cycle regulatory cascade, the p16 tumor suppressor gene is frequently lost in the Ewing family of tumors.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Recurrent gains of 1q, 8 and 12 in the Ewing family of tumours by comparative genomic hybridization

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Cloning and characterization of AFX, the gene that fuses to MLL in acute leukemias with a t(X;11)(q13;q23)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

WAF1, a potential mediator of p53 tumor suppression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Mutations of the p53 gene are involved in Ewing's sarcomas but not in neuroblastomas.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Chromosomes in Ewing's sarcoma. I. An evaluation of 85 cases of remarkable consistency of t(11;22)(q24;q12)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Whole-genome and whole-exome sequencing of bladder cancer identifies frequent alterations in genes involved in sister chromatid cohesion and segregation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Frameshift mutations of chromosome cohesion-related genes SGOL1 and PDS5B in gastric and colorectal cancers with high microsatellite instability

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

The specific contributions of cohesin-SA1 to cohesion and gene expression: implications for cancer and development.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Germline BRCA2 mutations and the risk of esophageal squamous cell carcinoma

29 October 2018

1 reference

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Increased prevalence of the BRCA2 polymorphic stop codon K3326X among individuals with familial pancreatic cancer.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Ewing sarcomas with p53 mutation or p16/p14ARF homozygous deletion: a highly lethal subset associated with poor chemoresponse

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Prognostic impact of deletions at 1p36 and numerical aberrations in Ewing tumors.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Narrow spectrum of infrequent p53 mutations and absence of MDM2 amplification in Ewing tumours.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

The Ewing Family of Tumors -- A Subgroup of Small-Round-Cell Tumors Defined by Specific Chimeric Transcripts

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4091782

Clinicopathological significance of cell cycle regulation markers in a large series of genetically confirmed Ewing's Sarcoma Family of Tumors

29 October 2018

1 reference

12 December 2020

Identification of Rad51 alteration in patients with bilateral breast cancer

1 reference

12 December 2020

Analysis of the p16INK4, p14ARF, p15, TP53, and MDM2 genes and their prognostic implications in osteosarcoma and Ewing sarcoma

1 reference

12 December 2020

Prognostic impact of INK4A deletion in Ewing sarcoma

1 reference

12 December 2020

P53 mutations in Ewing's sarcoma

1 reference

12 December 2020

Molecular analysis of the 9p21 locus and p53 genes in Ewing family tumors

1 reference

12 December 2020

Genetic heterogeneity in the alveolar rhabdomyosarcoma subset without typical gene fusions

1 reference

12 December 2020

p53 mutations in human tumors with chimericEWS/FLI/1 genes

1 reference

12 December 2020

A polymorphic stop codon in BRCA2

1 reference

12 December 2020

10.1371/JOURNAL.PGEN.1004475

Identifiers

DOI

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29 July 2017

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29 July 2017

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