(Q33883670)

29 July 2017

title

Change of positive selection pressure on HIV-1 envelope gene inferred by early and recent samples (English)

1 reference

29 July 2017

Izumi Yoshida

1

1 reference

29 July 2017

Wataru Sugiura

2

1 reference

29 July 2017

Junko Shibata

3

1 reference

29 July 2017

Fengrong Ren

4

1 reference

29 July 2017

Ziheng Yang

5

1 reference

29 July 2017

Hiroshi Tanaka

6

1 reference

29 July 2017

language of work or name

English

0 references

publication date

19 April 2011

1 reference

29 July 2017

1 reference

29 July 2017

volume

6

1 reference

29 July 2017

issue

4

1 reference

29 July 2017

page(s)

e18630

1 reference

Creative Commons Attribution 4.0 International

29 July 2017

copyright license

start time

19 April 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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28 July 2018

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Adaptation of HIV-1 to human leukocyte antigen class I

28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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Constraints on HIV-1 evolution and immunodominance revealed in monozygotic adult twins infected with the same virus

28 July 2018

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Replicative fitness of historical and recent HIV-1 isolates suggests HIV-1 attenuation over time.

28 July 2018

1 reference

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28 July 2018

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28 July 2018

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28 July 2018

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Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences

28 July 2018

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28 July 2018

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28 July 2018

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Immune-mediated positive selection drives human immunodeficiency virus type 1 molecular variation and predicts disease duration.

28 July 2018

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28 July 2018

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Timing the ancestor of the HIV-1 pandemic strains

28 July 2018

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Reevaluation of amino acid variability of the human immunodeficiency virus type 1 gp120 envelope glycoprotein and prediction of new discontinuous epitopes

28 July 2018

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Sequence-based association analysis of HLA class I and II alleles in Japanese supports conservation of common haplotypes

28 July 2018

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In vivo sequence variability of human immunodeficiency virus type 1 envelope gp120: association of V2 extension with slow disease progression

28 July 2018

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Tempo and mode of nucleotide substitutions in gag and env gene fragments in human immunodeficiency virus type 1 populations with a known transmission history

28 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3079721

The HIV coreceptors CXCR4 and CCR5 are differentially expressed and regulated on human T lymphocytes

28 July 2018

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28 July 2018

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Convergent and divergent sequence evolution in the surface envelope glycoprotein of human immunodeficiency virus type 1 within a single infected patient

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3079721

Temporal trends in postseroconversion CD4 cell count and HIV load: the Concerted Action on Seroconversion to AIDS and Death in Europe Collaboration, 1985-2002.

28 July 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

Survey of the temporal changes in HIV-1 replicative fitness in the Amsterdam Cohort

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

Increasing clinical virulence in two decades of the Italian HIV epidemic

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

Association between the rate of CD4+ T cell decrease and the year of human immunodeficiency virus (HIV) type 1 seroconversion among persons enrolled in the Swiss HIV cohort study

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

A maximum likelihood method for detecting functional divergence at individual codon sites, with application to gene family evolution

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

Evolutionary mechanisms and population dynamics of the third variable envelope region of HIV within single hosts

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

Identification of 187 single nucleotide polymorphisms (SNPs) among 41 candidate genes for ischemic heart disease in the Japanese population

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

Reversion of CTL escape–variant immunodeficiency viruses in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

Branch-length prior influences Bayesian posterior probability of phylogeny.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

Stable virulence levels in the HIV epidemic of Switzerland over two decades

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

Identification of 142 single nucleotide polymorphisms in 41 candidate genes for rheumatoid arthritis in the Japanese population

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018630

A codon-based model of nucleotide substitution for protein-coding DNA sequences

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3079721

Variation is the spice of life

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21526184

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Temporal trends of the natural history of HIV-1 infection following seroconversion between 1984 and 1993

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21526184

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Is HIV-1 evolving to a less virulent form in humans?

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21526184

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0018630

1 reference

29 July 2017

0 references

1 reference

29 July 2017

1 reference