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Prioritizing candidate disease genes by network-based boosting of genome-wide association data.
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3129253
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30 January 2020
title
Prioritizing candidate disease genes by network-based boosting of genome-wide association data
(English)
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30 January 2020
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genome-wide association study
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prioritization
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based on heuristic
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author
Edward Marcotte
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5
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30 January 2020
Insuk Lee
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Insuk Lee
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30 January 2020
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U Martin Blom
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2
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30 January 2020
Peggy I Wang
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30 January 2020
Jung Eun Shim
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4
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30 January 2020
publication date
2 May 2011
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30 January 2020
published in
Genome Research
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30 January 2020
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21
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30 January 2020
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1109-1121
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30 January 2020
issue
7
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30 January 2020
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5 July 2018
The tumor suppressor CYLD interacts with TRIP and regulates negatively nuclear factor kappaB activation by tumor necrosis factor
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
A Bayesian framework for combining heterogeneous data sources for gene function prediction (in Saccharomyces cerevisiae).
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stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
An efficient algorithm for large-scale detection of protein families
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
Mutations in each of the five subunits of translation initiation factor eIF2B can cause leukoencephalopathy with vanishing white matter
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
Systematic genetic analysis with ordered arrays of yeast deletion mutants
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
Subunits of the translation initiation factor eIF2B are mutant in leukoencephalopathy with vanishing white matter
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
A network of protein-protein interactions in yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
Protein interaction maps for complete genomes based on gene fusion events
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
A combined algorithm for genome-wide prediction of protein function
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
Activation of Raf-1 during experimental gastric ulcer healing is Ras-mediated and protein kinase C-independent
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
Identification of Grb2 as a novel binding partner of tumor necrosis factor (TNF) receptor I.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
Germline mutation of MSH6 as the cause of hereditary nonpolyposis colorectal cancer
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
The human mutator gene homolog MSH2 and its association with hereditary nonpolyposis colon cancer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
5 July 2018
Align human interactome with phenome to identify causative genes and networks underlying disease families.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
29 October 2018
Genetic variants in protein kinase C zeta gene and type 2 diabetes risk: a case-control study of a Chinese Han population
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
29 October 2018
Pathway analysis of single-nucleotide polymorphisms potentially associated with glioblastoma multiforme susceptibility using random forests.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
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29 October 2018
Sizing up human height variation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
29 October 2018
Cdc42- and Rac1-mediated endothelial lumen formation requires Pak2, Pak4 and Par3, and PKC-dependent signaling.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
29 October 2018
A single gene network accurately predicts phenotypic effects of gene perturbation in Caenorhabditis elegans.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
29 October 2018
Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
29 October 2018
The synthetic genetic interaction spectrum of essential genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129253
retrieved
29 October 2018
Phenotype of patients with peroxisomal disorders subdivided into sixteen complementation groups
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21536720
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A probabilistic functional network of yeast genes
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21536720
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Probabilistic model of the human protein-protein interaction network
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21536720
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1101/GR.118992.110
1 reference
stated in
Europe PubMed Central
PMCID
3129253
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21536720%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 January 2020
PMCID
3129253
1 reference
stated in
Europe PubMed Central
PMCID
3129253
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21536720%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 January 2020
PubMed ID
21536720
1 reference
stated in
Europe PubMed Central
PMCID
3129253
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21536720%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 January 2020
ResearchGate publication ID
51092755
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