(Q33896337)

29 July 2017

title

PathText: a text mining integrator for biological pathway visualizations (English)

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29 July 2017

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1 reference

Yoshimasa Tsuruoka

4

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Sofia Ananiadou

series ordinal

6

object named as

Sophia Ananiadou

1 reference

29 July 2017

7

Jun'ichi Tsujii

1 reference

29 July 2017

3

Yukiko Matsuoka

1 reference

29 July 2017

Brian Kemper

1

1 reference

29 July 2017

Takuya Matsuzaki

series ordinal

2

1 reference

29 July 2017

Hiroaki Kitano

series ordinal

5

1 reference

29 July 2017

language of work or name

English

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publication date

1 June 2010

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29 July 2017

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29 July 2017

volume

26

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29 July 2017

issue

12

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29 July 2017

page(s)

i374-81

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Building a high-quality sense inventory for improved abbreviation disambiguation

29 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

A parsimony approach to biological pathway reconstruction/inference for genomes and metagenomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

The Systems Biology Graphical Notation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Evaluating contributions of natural language parsers to protein-protein interaction extraction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

FACTA: a text search engine for finding associated biomedical concepts

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

WikiPathways: pathway editing for the people

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

RDFScape: Semantic Web meets systems biology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

New challenges for text mining: mapping between text and manually curated pathways

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Corpus annotation for mining biomedical events from literature

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

e-Science and biological pathway semantics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Systems biology, metabolic modelling and metabolomics in drug discovery and development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Building an abbreviation dictionary using a term recognition approach

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Text mining and its potential applications in systems biology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Automatic pathway building in biological association networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Pathguide: a pathway resource list

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Minimum information requested in the annotation of biochemical models (MIRIAM)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Extracting human protein interactions from MEDLINE using a full-sentence parser

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Here is the evidence, now what is the hypothesis? The complementary roles of inductive and hypothesis-driven science in the post-genomic era

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Systems biology markup language: Level 2 and beyond

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

Gene ontology: tool for the unification of biology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881405

PathCase: pathways database system

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ221

Feature Forest Models for Probabilistic HPSG Parsing

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ221

The Pathway Editor: A tool for managing complex biological networks

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ221

Pathway studio—the analysis and navigation of molecular networks

21 January 2018

1 reference

12 December 2020

Model validation of biological pathways using Petri nets—demonstrated for apoptosis

1 reference

12 December 2020

Using process diagrams for the graphical representation of biological networks

1 reference

12 December 2020

BioThesaurus: a web-based thesaurus of protein and gene names

1 reference

12 December 2020

10.1093/BIOINFORMATICS/BTQ221

Identifiers

DOI

1 reference

journals/bioinformatics/KemperMMTKAT10

29 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

29 July 2017

1 reference