(Q33899064)

29 July 2017

title

Using next generation transcriptome sequencing to predict an ectomycorrhizal metabolome (English)

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29 July 2017

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Peter E Larsen

1

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29 July 2017

Avinash Sreedasyam

2

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29 July 2017

Geetika Trivedi

3

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29 July 2017

Gopi K Podila

4

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29 July 2017

Leland J Cseke

5

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29 July 2017

Frank R Collart

6

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29 July 2017

publication date

13 May 2011

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29 July 2017

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29 July 2017

volume

5

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29 July 2017

page(s)

70

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describes a project that uses

29 July 2017

Cytoscape

object named as

Cytoscape

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Using deep RNA sequencing for the structural annotation of the Laccaria bicolor mycorrhizal transcriptome

5 July 2018

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5 July 2018

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Harnessing ectomycorrhizal genomics for ecological insights

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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More than a carbon economy: nutrient trade and ecological sustainability in facultative arbuscular mycorrhizal symbioses

5 July 2018

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Two differentially regulated phosphate transporters from the symbiotic fungus Hebeloma cylindrosporum and phosphorus acquisition by ectomycorrhizal Pinus pinaster.

5 July 2018

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A gene repertoire for nitrogen transporters in Laccaria bicolor

5 July 2018

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A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome

5 July 2018

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RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

5 July 2018

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

5 July 2018

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Roles of phosphatidylinositol 3-kinase in root hair growth

5 July 2018

1 reference

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The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

5 July 2018

1 reference

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Transcriptional analysis of Pinus sylvestris roots challenged with the ectomycorrhizal fungus Laccaria bicolor.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

Mastering ectomycorrhizal symbiosis: the impact of carbohydrates

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

Identification, biochemical characterization, and subcellular localization of allantoate amidohydrolases from Arabidopsis and soybean.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

A Medicago truncatula phosphate transporter indispensable for the arbuscular mycorrhizal symbiosis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

Sugar for my honey: carbohydrate partitioning in ectomycorrhizal symbiosis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

Ecological and evolutionary significance of mycorrhizal symbioses in vascular plants (A Review)

5 July 2018

1 reference

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From genomics to chemical genomics: new developments in KEGG

5 July 2018

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Signaling in the arbuscular mycorrhizal symbiosis

5 July 2018

1 reference

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PvUPS1, an allantoin transporter in nodulated roots of French bean.

5 July 2018

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5 July 2018

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A novel superfamily of transporters for allantoin and other oxo derivatives of nitrogen heterocyclic compounds in Arabidopsis

5 July 2018

1 reference

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Four hundred-million-year-old vesicular arbuscular mycorrhizae

5 July 2018

1 reference

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Microautoradiographic localization of phosphate and carbohydrates in mycorrhizal roots of Populus tremula x Populus alba and the implications for transfer processes in ectomycorrhizal associations

5 July 2018

1 reference

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Linking plants to rocks: ectomycorrhizal fungi mobilize nutrients from minerals

5 July 2018

1 reference

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Plant acquisition of organic nitrogen in boreal forests

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

Gene ontology: tool for the unification of biology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

Cloning and characterization of a symbiosis-related gene from an ectomycorrhizal fungus Laccaria bicolor

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

The origin of land plants: A matter of mycotrophism

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

Carbon allocation to ectomycorrhizal fungi correlates with belowground allocation in culture studies.

5 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

Uptake and transfer of nutrients in ectomycorrhizal associations: interactions between photosynthesis and phosphate nutrition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

Fungal transcript pattern during the preinfection stage (12 h) of ectomycorrhiza formed between Pisolithus tinctorius and Castanea sativa roots, identified using cDNA microarrays.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

Global patterns of gene regulation associated with the development of ectomycorrhiza between birch (Betula pendula Roth.) and Paxillus involutus (Batsch) Fr.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

The sugar porter gene family of Laccaria bicolor: function in ectomycorrhizal symbiosis and soil-growing hyphae

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

The expanded family of ammonium transporters in the perennial poplar plant.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

A phosphate transporter gene from the extra-radical mycelium of an arbuscular mycorrhizal fungus Glomus intraradices is regulated in response to phosphate in the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

Regulation of the nitrogen transfer pathway in the arbuscular mycorrhizal symbiosis: gene characterization and the coordination of expression with nitrogen flux

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

The major pathways of carbohydrate metabolism in the ectomycorrhizal basidiomycete Laccaria bicolor S238N.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

Reprogramming plant cells for endosymbiosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

Uptake of inorganic and amino acid nitrogen from soil by Eucalyptus regnans and Eucalyptus pauciflora seedlings.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

Whole-genome sequencing and variant discovery in C. elegans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

Lateral root stimulation in the early interaction between Arabidopsis thaliana and the ectomycorrhizal fungus Laccaria bicolor: is fungal auxin the trigger?

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-70

Root adaptation and nitrogen source acquisition in natural ecosystems.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

Transcript patterns associated with ectomycorrhiza development in Eucalyptus globulus and Pisolithus microcarpus

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3114729

The ectomycorrhizal fungus Laccaria bicolor stimulates lateral root formation in poplar and Arabidopsis through auxin transport and signaling

29 October 2018

1 reference

12 December 2020

Differential effect of purified spruce chitinases and beta-1,3-glucanases on the activity of elicitors from ectomycorrhizal fungi

1 reference

12 December 2020

Uptake of nitrate, ammonium and glycine by plants of Tasmanian wet eucalypt forests

1 reference

12 December 2020

Ectomycorrhiza-mediated repression of the high-affinity ammonium importer gene AmAMT2 in Amanita muscaria

1 reference

12 December 2020

Relative abundance of ureides and nitrate in plant tissues of soybean as a quantitative assay of nitrogen fixation

1 reference

12 December 2020

Uptake, metabolism and distribution of organic and inorganic nitrogen sources by Pinus sylvestris

1 reference

12 December 2020

Measurement of nitrogen fixation by soybean in the field using the ureide and natural N abundance methods

1 reference

12 December 2020

Mycorrhiza-induced changes in disease severity and PR protein expression in tobacco leaves

1 reference

12 December 2020

High efficiency poplar transformation

1 reference

12 December 2020

Identifiers

DOI

10.1186/1752-0509-5-70

1 reference

journals/bmcsb/LarsenSTPCC11

29 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

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29 July 2017

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