Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q33901532)
Watch
English
NSMAP: a method for spliced isoforms identification and quantification from RNA-Seq.
scientific article
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
title
NSMAP: a method for spliced isoforms identification and quantification from RNA-Seq
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
main subject
RNA sequencing
1 reference
based on heuristic
inferred from title
RNA-Seq
1 reference
based on heuristic
inferred from title
author
Zheng Xia
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
author name string
Jianguo Wen
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
Chung-Che Chang
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
Xiaobo Zhou
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
publication date
16 May 2011
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
published in
BMC Bioinformatics
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
volume
12
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
page(s)
162
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
cites work
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Detection of splice junctions from paired-end RNA-seq data by SpliceMap.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
RNA-Seq gene expression estimation with read mapping uncertainty
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
The UCSC Genome Browser database: update 2010
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Computation for ChIP-seq and RNA-seq studies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Identifiability of isoform deconvolution from junction arrays and RNA-Seq.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
TopHat: discovering splice junctions with RNA-Seq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Statistical inferences for isoform expression in RNA-Seq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Mapping short DNA sequencing reads and calling variants using mapping quality scores
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Mapping and quantifying mammalian transcriptomes by RNA-Seq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Viral population estimation using pyrosequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
SPACE: an algorithm to predict and quantify alternatively spliced isoforms using microarrays.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Understanding alternative splicing: towards a cellular code
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Optimization of oligonucleotide arrays and RNA amplification protocols for analysis of transcript structure and alternative splicing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Alternative splicing: multiple control mechanisms and involvement in human disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Pathogenesis, etiology and epidemiology of myelodysplastic syndromes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113944
retrieved
5 July 2018
Gene structure-based splice variant deconvolution using a microarray platform.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2F1471-2105-12-162
retrieved
21 January 2018
Advancing RNA-Seq analysis
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21575225
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Mitochondrial DNA mutations in patients with myelodysplastic syndromes
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21575225
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1186/1471-2105-12-162
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
DBLP publication ID
journals/bmcbi/XiaWCZ11
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
Dimensions Publication ID
1006852639
0 references
Internet Archive ID
pubmed-PMC3113944
0 references
PMC publication ID
3113944
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
PubMed publication ID
21575225
1 reference
stated in
Europe PubMed Central
PMC publication ID
3113944
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21575225%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 February 2020
ResearchGate publication ID
51129576
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit
