(Q33910553)

30 July 2017

title

Exploring the metabolic network of the epidemic pathogen Burkholderia cenocepacia J2315 via genome-scale reconstruction (English)

1 reference

30 July 2017

main subject

Burkholderia cenocepacia

object named as

Burkholderia cenocepacia

1 reference

Kechi Fang

1

1 reference

30 July 2017

Hansheng Zhao

2

1 reference

30 July 2017

Changyue Sun

3

1 reference

30 July 2017

Carolyn M C Lam

4

1 reference

30 July 2017

Suhua Chang

5

1 reference

30 July 2017

Kunlin Zhang

6

1 reference

30 July 2017

Gurudutta Panda

7

1 reference

30 July 2017

Miguel Godinho

8

1 reference

30 July 2017

Vítor A P Martins dos Santos

9

1 reference

30 July 2017

Jing Wang

10

1 reference

30 July 2017

publication date

25 May 2011

1 reference

30 July 2017

1 reference

30 July 2017

volume

5

1 reference

30 July 2017

page(s)

83

1 reference

https://scigraph.springernature.com/pub.10.1186/1752-0509-5-83

30 July 2017

exact match

0 references

cites work

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28 July 2018

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Gene expression changes linked to antimicrobial resistance, oxidative stress, iron depletion and retained motility are observed when Burkholderia cenocepacia grows in cystic fibrosis sputum

28 July 2018

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28 July 2018

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28 July 2018

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Nutritional cues control Pseudomonas aeruginosa multicellular behavior in cystic fibrosis sputum

28 July 2018

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Investigating the metabolic capabilities of Mycobacterium tuberculosis H37Rv using the in silico strain iNJ661 and proposing alternative drug targets

28 July 2018

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Characterization of two distinct phospholipase C enzymes from Burkholderia pseudomallei

28 July 2018

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Look who's talking: communication and quorum sensing in the bacterial world.

28 July 2018

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Cationic host defence peptides: innate immune regulatory peptides as a novel approach for treating infections.

28 July 2018

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28 July 2018

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28 July 2018

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Coordinate expression of the acetyl coenzyme A carboxylase genes, accB and accC, is necessary for normal regulation of biotin synthesis in Escherichia coli

28 July 2018

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Experimental and computational assessment of conditionally essential genes in Escherichia coli

28 July 2018

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Burkholderia cenocepacia ZmpB is a broad-specificity zinc metalloprotease involved in virulence

28 July 2018

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A complete lipopolysaccharide inner core oligosaccharide is required for resistance of Burkholderia cenocepacia to antimicrobial peptides and bacterial survival in vivo.

28 July 2018

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Quorum sensing in the genus Burkholderia.

28 July 2018

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An ordered, nonredundant library of Pseudomonas aeruginosa strain PA14 transposon insertion mutants

28 July 2018

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In silico genome-scale reconstruction and validation of the Staphylococcus aureus metabolic network.

28 July 2018

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Characterization of the cciIR quorum-sensing system in Burkholderia cenocepacia

28 July 2018

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Antimicrobial peptide therapeutics for cystic fibrosis

28 July 2018

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Functional analysis of the Burkholderia cenocepacia ZmpA metalloprotease

28 July 2018

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28 July 2018

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Reconstitution of O-specific lipopolysaccharide expression in Burkholderia cenocepacia strain J2315, which is associated with transmissible infections in patients with cystic fibrosis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

The multifarious, multireplicon Burkholderia cepacia complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Identification of a gene required for the formation of lyso-ornithine lipid, an intermediate in the biosynthesis of ornithine-containing lipids

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Contribution of Burkholderia cenocepacia flagella to infectivity and inflammation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Identification of Burkholderia cenocepacia genes required for bacterial survival in vivo

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Comparative genomics, minimal gene-sets and the last universal common ancestor

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

The Burkholderia cepacia epidemic strain marker is part of a novel genomic island encoding both virulence and metabolism-associated genes in Burkholderia cenocepacia

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Isolation and characterization of Burkholderia cenocepacia mutants deficient in pyochelin production: pyochelin biosynthesis is sensitive to sulfur availability

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

BRENDA, the enzyme database: updates and major new developments

28 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

28 July 2018

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

GeneDB: a resource for prokaryotic and eukaryotic organisms

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Comprehensive transposon mutant library of Pseudomonas aeruginosa

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

28 July 2018

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Lipopolysaccharide of Burkholderia cepacia complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Attenuated virulence of a Burkholderia cepacia type III secretion mutant in a murine model of infection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Burkholderia cepacia complex infection in patients with cystic fibrosis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Multi-subunit acetyl-CoA carboxylases

28 July 2018

1 reference

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Role of flagella in host cell invasion by Burkholderia cepacia

28 July 2018

1 reference

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Diversity of the Burkholderia cepacia complex and implications for risk assessment of biological control strains

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Taxonomy and identification of the Burkholderia cepacia complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Invasion and intracellular survival of Burkholderia cepacia

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Role of ornibactin biosynthesis in the virulence of Burkholderia cepacia: characterization of pvdA, the gene encoding L-ornithine N(5)-oxygenase

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Activities of LL-37, a cathelin-associated antimicrobial peptide of human neutrophils

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Burkholderia cepacia produces a hemolysin that is capable of inducing apoptosis and degranulation of mammalian phagocytes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Evidence for transmission of Pseudomonas cepacia by social contact in cystic fibrosis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Growth rate regulation of Escherichia coli acetyl coenzyme A carboxylase, which catalyzes the first committed step of lipid biosynthesis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Cable (cbl) type II pili of cystic fibrosis-associated Burkholderia (Pseudomonas) cepacia: nucleotide sequence of the cblA major subunit pilin gene and novel morphology of the assembled appendage fibers

28 July 2018

1 reference

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Preliminary evaluation of Biolog, a carbon source utilization method for bacterial identification

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Proposal of Burkholderia gen. nov. and Transfer of Seven Species of the Genus Pseudomonas Homology Group II to the New Genus, with the Type Species Burkholderia cepacia (Palleroni and Holmes 1981) comb. nov

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Taxon K, a complex within the Burkholderia cepacia complex, comprises at least two novel species, Burkholderia contaminans sp. nov. and Burkholderia lata sp. nov.

28 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Burkholderia cenocepacia sp. nov.--a new twist to an old story.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii

21 January 2018

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From a local dialect to a common language.

21 January 2018

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Communication systems in the genus Burkholderia: global regulators and targets for novel antipathogenic drugs

21 January 2018

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A novel DSF-like signal from Burkholderia cenocepacia interferes with Candida albicans morphological transition

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Importance of the ornibactin and pyochelin siderophore transport systems in Burkholderia cenocepacia lung infections

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Interaction of cblA/adhesin-positive Burkholderia cepacia with squamous epithelium.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Burkholderia cenocepacia zinc metalloproteases influence resistance to antimicrobial peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Involvement of a plasmid-encoded type IV secretion system in the plant tissue watersoaking phenotype of Burkholderia cenocepacia

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

A putative gene cluster for aminoarabinose biosynthesis is essential for Burkholderia cenocepacia viability

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Lack of correlation between O-serotype, bacteriophage susceptibility and genomovar status in the Burkholderia cepacia complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

The Pseudomonas aeruginosa 4-quinolone signal molecules HHQ and PQS play multifunctional roles in quorum sensing and iron entrapment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Burkholderia thailandensis harbors two identical rhl gene clusters responsible for the biosynthesis of rhamnolipids

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Contributions of two UDP-glucose dehydrogenases to viability and polymyxin B resistance of Burkholderia cenocepacia

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Metabolic modelling of microbes: the flux-balance approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

(Re-)construction, characterization and modeling of systems for synthetic biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

From genomics to chemical genomics: new developments in KEGG

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

TarO: a target optimisation system for structural biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

TCDB: the Transporter Classification Database for membrane transport protein analyses and information

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Burkholderia cenocepacia J2315 acyl carrier protein: a potential target for antimicrobials' development?

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

An outbreak of Burkholderia cenocepacia bacteremia in immunocompromised oncology patients

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Differentiation of species combined into the Burkholderia cepacia complex and related taxa on the basis of their fatty acid patterns

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Lack of cable pili expression by cblA-containing Burkholderia cepacia complex.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Identification and sequences of the Treponema pallidum mglA and mglC genes

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

Characterization of the mgl operon of Escherichia coli by transposon mutagenesis and molecular cloning.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123600

The Complete Structure and Pro-inflammatory Activity of the Lipooligosaccharide of the Highly Epidemic and Virulent Gram-Negative BacteriumBurkholderia cenocepacia ET-12 (Strain J2315)

29 October 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-83

Genome-scale metabolic network analysis and drug targeting of multi-drug resistant pathogen Acinetobacter baumannii AYE

21 January 2018

1 reference

12 December 2020

Targeting multiple targets in Pseudomonas aeruginosa PAO1 using flux balance analysis of a reconstructed genome-scale metabolic network

1 reference

12 December 2020

Caenorhabditis elegans killing assay as an infection model to study the role of type III secretion in Burkholderia cenocepacia

1 reference

12 December 2020

Suppression-subtractive hybridisation reveals variations in gene distribution amongst the Burkholderia cepacia complex, including the presence in some strains of a genomic island containing putative polysaccharide production genes

1 reference

12 December 2020

Phenotypic variation of lipid composition in Burkholderia cepacia: a response to increased growth temperature is a greater content of 2-hydroxy acids in phosphatidylethanolamine and ornithine amide lipid

1 reference

12 December 2020

Identifiers

DOI

10.1186/1752-0509-5-83

1 reference

journals/bmcsb/FangZSLCZPGS011

30 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

30 July 2017

1 reference