(Q33914083)

30 July 2017

title

Structure of lambda CII: implications for recognition of direct-repeat DNA by an unusual tetrameric organization (English)

1 reference

30 July 2017

Santosh Panjikar

2

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author name string

Ajit B Datta

1

1 reference

30 July 2017

Manfred S Weiss

3

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30 July 2017

Pinak Chakrabarti

4

1 reference

30 July 2017

Pradeep Parrack

5

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30 July 2017

language of work or name

English

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publication date

1 August 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

published in

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30 July 2017

volume

102

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30 July 2017

issue

32

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30 July 2017

page(s)

11242-11247

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The CCP4 suite: programs for protein crystallography

30 July 2017

cites work

1 reference

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Interactions among CII protein, RNA polymerase and the lambda PRE promoter: contacts between RNA polymerase and the -35 region of PRE are identical in the presence and absence of CII protein

28 July 2018

1 reference

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Role of the RNA polymerase alpha subunits in CII-dependent activation of the bacteriophage lambda pE promoter: identification of important residues and positioning of the alpha C-terminal domains.

28 July 2018

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Region 4 of sigma as a target for transcription regulation

28 July 2018

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Crystal structure of a full-length LysR-type transcriptional regulator, CbnR: unusual combination of two subunit forms and molecular bases for causing and changing DNA bend

28 July 2018

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The phage lambda CII transcriptional activator carries a C-terminal domain signaling for rapid proteolysis

28 July 2018

1 reference

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Substructure solution with SHELXD

28 July 2018

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Structure of the bacterial RNA polymerase promoter specificity sigma subunit

28 July 2018

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Crystal structure of the global regulator FlhD from Escherichia coli at 1.8 A resolution

28 July 2018

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Structural symmetry and protein function

28 July 2018

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Miscellaneous algorithms for density modification

28 July 2018

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28 July 2018

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Impaired lysogenisation of the Escherichia coli rpoA341 mutant by bacteriophage lambda is due to the inability of CII to act as a transcriptional activator

28 July 2018

1 reference

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Structural classification of HTH DNA-binding domains and protein-DNA interaction modes

28 July 2018

1 reference

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Crystal structure of the lactose operon repressor and its complexes with DNA and inducer

28 July 2018

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Principles of protein-protein interactions

28 July 2018

1 reference

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Crystal structure of globular domain of histone H5 and its implications for nucleosome binding

28 July 2018

1 reference

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High-resolution structure of the oligomerization domain of p53 by multidimensional NMR

28 July 2018

1 reference

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Structural basis of asymmetry in the human immunodeficiency virus type 1 reverse transcriptase heterodimer

28 July 2018

1 reference

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The lysis-lysogeny decision of phage lambda: explicit programming and responsiveness

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Sequence analysis of a region from the early right operon in phage P22 including the replication genes 18 and 12

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Kinetic analysis of mutations affecting the cII activation site at the PRE promoter of bacteriophage lambda

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Mutational analysis of a regulatory region in bacteriophage lambda that has overlapping signals for the initiation of transcription and translation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Role of cII protein in stimulating transcription initiation at the lambda PRE promoter. Enhanced formation and stabilization of open complexes

28 July 2018

1 reference

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Purification and properties of a transcriptional activator. The cII protein of phage lambda

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

The interpretation of protein structures: Estimation of static accessibility

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Bacteriophage P22 Cro protein: sequence, purification, and properties

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Identification of the DNA binding domain of the phage lambda cII transcriptional activator and the direct correlation of cII protein stability with its oligomeric forms

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Cross-specificities between cII-like proteins and pRE-like promoters of lambdoid bacteriophages

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

hflB, a new Escherichia coli locus regulating lysogeny and the level of bacteriophage lambda cII protein.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

The helix-turn-helix DNA binding motif

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

A structural taxonomy of DNA-binding domains

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Activation defects caused by mutations in Escherichia coli rpoA are promoter specific

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Transcription factors: structural families and principles of DNA recognition

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Involvement of the Escherichia coli RNA polymerase alpha subunit in transcriptional activation by the bacteriophage lambda CI and CII proteins.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Structure and function of the cy control region of bacteriophage lambda.

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504535102

Role of C-terminal residues in oligomerization and stability of lambda CII: implications for lysis-lysogeny decision of the phage

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504535102

Processing of X-ray diffraction data collected in oscillation mode

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504535102

Disorder–order transition of λ CII promoted by low concentrations of guanidine hydrochloride suggests a stable core and a flexible C‐terminus

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504535102

Protein structure comparison by alignment of distance matrices

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504535102

Dissecting subunit interfaces in homodimeric proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504535102

A dissection of specific and non-specific protein-protein interfaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504535102

Four helix bundle diversity in globular proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504535102

Crystal structure of LacI member, PurR, bound to DNA: minor groove binding by alpha helices

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504535102

A single-base-pair mutation changes the specificities of both a transcription activation protein and its binding site.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504535102

Automated structure solution, density modification and model building

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183575

Purified λ regulatory protein cII positively activates promoters for lysogenic development

29 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504535102

Purification and crystallization of CII: an unstable transcription activator from phage lambda

21 January 2018

1 reference

12 December 2020

DNA-binding properties of a lac repressor mutant incapable of forming tetramers

1 reference

12 December 2020

Structure of a complex of catabolite gene activator protein and cyclic AMP refined at 2.5 A resolution

1 reference

12 December 2020

Constitutive function of a positively regulated promoter reveals new sequences essential for activity

1 reference

12 December 2020

Bacteriophage λ protein cII binds promoters on the opposite face of the DNA helix from RNA polymerase

1 reference

12 December 2020

High resolution x-ray structure of yeast hexokinase, an allosteric protein exhibiting a non-symmetric arrangement of subunits

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0504535102

1 reference

30 July 2017

0 references

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30 July 2017

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