(Q33918278)

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Spliced leader RNAs, mitochondrial gene frameshifts and multi-protein phylogeny expand support for the genus Perkinsus as a unique group of alveolates

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Europe PubMed Central

PubMed publication ID

30 July 2017

Spliced leader RNAs, mitochondrial gene frameshifts and multi-protein phylogeny expand support for the genus Perkinsus as a unique group of alveolates (English)

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

1 reference

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inferred from title

Christopher F Dungan

4

object named as

Christopher F Dungan

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

5

object named as

Senjie Lin

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

author name string

Huan Zhang

1

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

David A Campbell

2

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Nancy R Sturm

3

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Europe PubMed Central

PubMed publication ID

30 July 2017

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publication date

24 May 2011

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Europe PubMed Central

PubMed publication ID

30 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

6

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

e19933

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

copyright license

Creative Commons Attribution 4.0 International

24 May 2011

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April 2022 Public Data File from Crossref

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mRNA EDITING AND SPLICED-LEADER RNA TRANS-SPLICING GROUPS OXYRRHIS, NOCTILUCA, HETEROCAPSA, AND AMPHIDINIUM AS BASAL LINEAGES OF DINOFLAGELLATES(1).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Spliced leader-based metatranscriptomic analyses lead to recognition of hidden genomic features in dinoflagellates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Transcriptome analysis reveals nuclear-encoded proteins for the maintenance of temporary plastids in the dinoflagellate Dinophysis acuminata

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Extensive frameshift at all AGG and CCC codons in the mitochondrial cytochrome c oxidase subunit 1 gene of Perkinsus marinus (Alveolata; Dinoflagellata).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

The Alveolate Perkinsus marinus: biological insights from EST gene discovery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Molecular phylogeny of noctilucoid dinoflagellates (Noctilucales, Dinophyceae)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Encoding multiple unnatural amino acids via evolution of a quadruplet-decoding ribosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Distinct gene number-genome size relationships for eukaryotes and non-eukaryotes: gene content estimation for dinoflagellate genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Dinoflagellate spliced leader RNA genes display a variety of sequences and genomic arrangements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Recoding of translation in turtle mitochondrial genomes: programmed frameshift mutations and evidence of a modified genetic code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Widespread occurrence and genetic diversity of marine parasitoids belonging to Syndiniales (Alveolata).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

From stop to start: tandem gene arrangement, copy number and trans-splicing sites in the dinoflagellate Amphidinium carterae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Description, host-specificity, and strain selectivity of the dinoflagellate parasite Parvilucifera sinerae sp. nov. (Perkinsozoa).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

The toxic dinoflagellate Karenia brevis encodes novel type I-like polyketide synthases containing discrete catalytic domains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Spliced leader RNA trans-splicing in dinoflagellates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Programmed ribosomal frameshifting in HIV-1 and the SARS-CoV.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

ProtTest: selection of best-fit models of protein evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Diversity and evolution of mitochondrial RNA editing systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Multiple protein phylogenies show that Oxyrrhis marina and Perkinsus marinus are early branches of the dinoflagellate lineage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Genome sequence of the human malaria parasite Plasmodium falciparum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Members of a dinoflagellate luciferase gene family differ in synonymous substitution rates.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

MRBAYES: Bayesian inference of phylogenetic trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Dinoflagellate nuclear SSU rRNA phylogeny suggests multiple plastid losses and replacements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Expanding the genetic code: selection of efficient suppressors of four-base codons and identification of "shifty" four-base codons with a library approach in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Transcription termination and 3'-End processing of the spliced leader RNA in kinetoplastids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

Rubisco in marine symbiotic dinoflagellates: form II enzymes in eukaryotic oxygenic phototrophs encoded by a nuclear multigene family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

5 July 2018

'Total evidence' refutes the inclusion of Perkinsus species in the phylum Apicomplexa

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019933

21 January 2018

The expression of a plant-type ferredoxin redox system provides molecular evidence for a plastid in the early dinoflagellate Perkinsus marinus

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019933

21 January 2018

Parvilucifera infectans norén et moestrup gen. et sp. nov. (perkinsozoa phylum nov.): a parasitic flagellate capable of killing toxic microalgae

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019933

21 January 2018

Introns, alternative splicing, spliced leader trans-splicing and differential expression of pcna and cyclin in Perkinsus marinus.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019933

21 January 2018

Isolation and characterization of proliferating cell nuclear antigen from the dinoflagellate Pfiesteria piscicida.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019933

21 January 2018

Single nucleotide +1 frameshifts in an apparently functional mitochondrial cytochrome b gene in ants of the genus Polyrhachis.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019933

21 January 2018

Spliced leader RNA-mediated trans-splicing in a dinoflagellate, Karenia brevis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019933

21 January 2018

Identification of two spliced leader RNA transcripts from Perkinsus marinus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101222

29 October 2018

Widespread recycling of processed cDNAs in dinoflagellates

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019933

21 January 2018

Molecular karyotype analysis of Perkinsus atlanticus (Phylum Perkinsozoa) by pulsed field gel electrophoresis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019933

21 January 2018

A three-gene dinoflagellate phylogeny suggests monophyly of prorocentrales and a basal position for amphidinium and heterocapsa

1 reference

https://pubmed.ncbi.nlm.nih.gov/21629701

12 December 2020

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10.1371/JOURNAL.PONE.0019933

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

2011PLoSO...619933Z

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

ResearchGate publication ID

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