(Q33920150)

30 July 2017

title

Chromatin immunoprecipitation cloning reveals rapid evolutionary patterns of centromeric DNA in Oryza species (English)

1 reference

30 July 2017

Tim Langdon

3

0 references

author name string

Hye-Ran Lee

1

1 reference

30 July 2017

Wenli Zhang

2

1 reference

30 July 2017

Weiwei Jin

4

1 reference

30 July 2017

Huihuang Yan

5

1 reference

30 July 2017

Zhukuan Cheng

6

1 reference

30 July 2017

Jiming Jiang

7

1 reference

30 July 2017

language of work or name

English

0 references

publication date

22 July 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

published in

1 reference

30 July 2017

volume

102

1 reference

30 July 2017

issue

33

1 reference

30 July 2017

page(s)

11793-11798

1 reference

Rapid creation of BAC-based human artificial chromosome vectors by transposition with synthetic alpha-satellite arrays

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Structure, divergence, and distribution of the CRR centromeric retrotransposon family in rice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Adaptive evolution of centromere proteins in plants and animals

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Building the centromere: from foundation proteins to 3D organization.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Rapid recent growth and divergence of rice nuclear genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

WebLogo: A Sequence Logo Generator

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Evolutionary history of Oryza sativa LTR retrotransposons: a preliminary survey of the rice genome sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

MUSCLE: multiple sequence alignment with high accuracy and high throughput

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Sequencing of a rice centromere uncovers active genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

A molecular view of plant centromeres

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

DNA and proteins of plant centromeres.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

DNA analysis servers: plot.it, bend.it, model.it and IS.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

CENP-B box is required for de novo centromere chromatin assembly on human alphoid DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Conflict begets complexity: the evolution of centromeres

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

PatternHunter: faster and more sensitive homology search

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

The centromere paradox: stable inheritance with rapidly evolving DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Adaptive evolution of Cid, a centromere-specific histone in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

The large-scale organization of the centromeric region in Beta species

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Retrotransposon evolution in diverse plant genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Phylogeny of rice genomes with emphasis on origins of allotetraploid species

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Isolation of a species-specific satellite DNA with a novel CENP-B-like box from the North African rodent Lemniscomys barbarus.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Chromosome-specific molecular organization of maize (Zea mays L.) centromeric regions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Interspersed centromeric element with a CENP-B box-like motif in Chironomus pallidivittatus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Rice (Oryza sativa) centromeric regions consist of complex DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Origin, dispersal, cultivation and variation of rice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Metaphase and interphase fluorescence in situ hybridization mapping of the rice genome with bacterial artificial chromosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

A human centromere antigen (CENP-B) interacts with a short specific sequence in alphoid DNA, a human centromeric satellite

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

An improved bacterial colony lysis procedure enables direct DNA hybridisation using short (10, 11 bases) oligonucleotides to cosmids

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Investigation of the organization of mammalian chromosomes at the DNA sequence level

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

Centromeres: the missing link in the development of human artificial chromosomes

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Conserved patterns in the evolution of Tribolium satellite DNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Transcription of lampbrush chromosomes of a centromerically localized highly repeated DNA in pigeon (Columba) relates to sequence arrangement

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

A novel repetitive sequence of sugar cane, SCEN family, locating on centromeric regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Centromeric localization and adaptive evolution of an Arabidopsis histone H3 variant

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Adaptive evolution of the histone fold domain in centromeric histones

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Evolution of Repeated DNA Sequences by Unequal Crossover

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Functional rice centromeres are marked by a satellite repeat and a centromere-specific retrotransposon

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Comparative genetics at the gene and chromosome levels between rice ( Oryza sativa) and wildrice ( Zizania palustris).

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

A chromatin immunoprecipitation (ChIP) approach to isolate genes regulated by AGL15, a MADS domain protein that preferentially accumulates in embryos.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Centromeric retroelements and satellites interact with maize kinetochore protein CENH3.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Molecular and physical organization of highly repetitive, undermethylated DNA from Pennisetum glaucum

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Something from nothing: the evolution and utility of satellite repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Molecular-cytogenetic characterization of a higher plant centromere/kinetochore complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Retrotransposon-related DNA sequences in the centromeres of grass chromosomes.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1187982

The evolutionary dynamics of repetitive DNA in eukaryotes

29 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0503863102

Conserved patterns of bending in satellite and nucleosome positioning DNA

21 January 2018

1 reference

12 December 2020

Origin of the main class of repetitive DNA within selected Pennisetum species

1 reference

12 December 2020

Identification of a family of human centromere proteins using autoimmune sera from patients with scleroderma

1 reference

12 December 2020

Maize centromeres: organization and functional adaptation in the genetic background of oat

1 reference

12 December 2020

Late-replicating satellites: something for all centromeres?

1 reference

12 December 2020

Molecular and functional dissection of the maize B chromosome centromere

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0503863102

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference