(Q33933897)

30 July 2017

title

Mechanism of peptide bond synthesis on the ribosome (English)

1 reference

30 July 2017

2

Johan Aqvist

1 reference

30 July 2017

Stefan Trobro

1

1 reference

30 July 2017

language of work or name

English

0 references

publication date

22 August 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

published in

1 reference

30 July 2017

volume

102

1 reference

30 July 2017

issue

35

1 reference

30 July 2017

page(s)

12395-12400

1 reference

Chemical engineering of the peptidyl transferase center reveals an important role of the 2'-hydroxyl group of A2451

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

The ribosome as an entropy trap

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

New strategies for exploring RNA's 2'-OH expose the importance of solvent during group II intron catalysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

Kinetic and thermodynamic characterization of HIV-1 protease inhibitors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

After the ribosome structures: how does peptidyl transferase work?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

Structural basis of the ribosomal machinery for peptide bond formation, translocation, and nascent chain progression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

Structural insights into peptide bond formation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

Ribosome structure and the mechanism of translation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

A pre-translocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

High resolution structure of the large ribosomal subunit from a mesophilic eubacterium

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

Structure of the 30S ribosomal subunit

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

The structural basis of ribosome activity in peptide bond synthesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

Entropic Contributions to Rate Accelerations in Enzymic and Intramolecular Reactions and the Chelate Effect

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1194925

Important contribution to catalysis of peptide bond formation by a single ionizing group within the ribosome.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504043102

Q: a molecular dynamics program for free energy calculations and empirical valence bond simulations in biomolecular systems.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504043102

Substrate-assisted catalysis of peptide bond formation by the ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504043102

How much do enzymes really gain by restraining their reacting fragments?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504043102

Role of Entropy in Increased Rates of Intramolecular Reactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504043102

Estimating entropies from molecular dynamics simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504043102

Donor site of ribosomal peptidyltransferase: investigation of substrate specificity using 2'(3')-O-(N-acylaminoacyl)dinucleoside phosphates as models of the 3' terminus of N-acylaminoacyl transfer ribonucleic acid

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16116099

12 December 2020

inferred from PubMed ID database lookup

A single adenosine with a neutral pKa in the ribosomal peptidyl transferase center

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16116099

12 December 2020

inferred from PubMed ID database lookup

Solvation, reorganization energy, and biological catalysis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16116099

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.0504043102

1 reference

release_pplskuek5vc25pqfcdujiobet4

30 July 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/pplskuek5vc25pqfcdujiobet4

24 November 2022

mapped directly with Wikidata item

PMC publication ID

1194925

1 reference

30 July 2017

1 reference