(Q33934477)

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The interaction between sigma70 and the beta-flap of Escherichia coli RNA polymerase inhibits extension of nascent RNA during early elongation

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15761057%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

The interaction between sigma70 and the beta-flap of Escherichia coli RNA polymerase inhibits extension of nascent RNA during early elongation (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15761057%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

Escherichia coli

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1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15761057%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

Richard H. Ebright

6

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15761057%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

author name string

Sean J Garrity

2

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9 January 2020

Vladimir Mekler

3

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9 January 2020

Leonid Minakhin

4

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9 January 2020

Konstantin Severinov

5

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9 January 2020

Ann Hochschild

7

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9 January 2020

language of work or name

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publication date

10 March 2005

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9 January 2020

number of pages

6

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Proceedings of the National Academy of Sciences of the United States of America

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9 January 2020

102

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Europe PubMed Central

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9 January 2020

12

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9 January 2020

4488-4493

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9 January 2020

Distance-restrained docking of rifampicin and rifamycin SV to RNA polymerase using systematic FRET measurements: developing benchmarks of model quality and reliability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

A bacterial two-hybrid system based on transcription activation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

On the role of the Escherichia coli RNA polymerase sigma 70 region 4.2 and alpha-subunit C-terminal domains in promoter complex formation on the extended -10 galP1 promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

An intersubunit contact stimulating transcription initiation by E coli RNA polymerase: interaction of the alpha C-terminal domain and sigma region 4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

RNA polymerase holoenzyme: structure, function and biological implications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Bacterial RNA polymerases: the wholo story

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Views of transcription initiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase-promoter open complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Translocation of sigma(70) with RNA polymerase during transcription: fluorescence resonance energy transfer assay for movement relative to DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Restructuring of an RNA polymerase holoenzyme elongation complex by lambdoid phage Q proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Allosteric control of RNA polymerase by a site that contacts nascent RNA hairpins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Mechanism for a transcriptional activator that works at the isomerization step

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

A structural model of transcription elongation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Aromatic amino acids in region 2.3 of Escherichia coli sigma 70 participate collectively in the formation of an RNA polymerase-promoter open complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Positioning of region 4 of the Escherichia coli RNA polymerase sigma(70) subunit by a transcription activator.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Interactions of Escherichia coli sigma(70) within the transcription elongation complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Antitermination by bacteriophage lambda Q protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

The functional and regulatory roles of sigma factors in transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Functional topography of nascent RNA in elongation intermediates of RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10' motif at promoters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Function of E. coli RNA polymerase sigma factor sigma 70 in promoter-proximal pausing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

RNA chain initiation by Escherichia coli RNA polymerase. Structural transitions of the enzyme in early ternary complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

A stressed intermediate in the formation of stably initiated RNA chains at the Escherichia coli lac UV5 promoter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Interaction of RNA polymerase with lacUV5 promoter DNA during mRNA initiation and elongation. Footprinting, methylation, and rifampicin-sensitivity changes accompanying transcription initiation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

The sigma 70 family: sequence conservation and evolutionary relationships

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555512

5 July 2018

Minimal machinery of RNA polymerase holoenzyme sufficient for promoter melting

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409850102

21 January 2018

A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409850102

21 January 2018

The sigma(70) subunit of RNA polymerase is contacted by the (lambda)Q antiterminator during early elongation

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409850102

21 January 2018

Activation of prokaryotic transcription through arbitrary protein-protein contacts.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409850102

21 January 2018

A hydrophobic patch on the flap-tip helix of E.coli RNA polymerase mediates sigma(70) region 4 function.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409850102

21 January 2018

Functional interaction between RNA polymerase alpha subunit C-terminal domain and sigma70 in UP-element- and activator-dependent transcription

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409850102

21 January 2018

In vitro studies of transcript initiation by Escherichia coli RNA polymerase. 3. Influences of individual DNA elements within the promoter recognition region on abortive initiation and promoter escape

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409850102

21 January 2018

Localization of a sigma70 binding site on the N terminus of the Escherichia coli RNA polymerase beta' subunit

1 reference

https://pubmed.ncbi.nlm.nih.gov/15761057

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein-protein and protein-DNA interactions of sigma70 region 4 involved in transcription activation by lambdacI

1 reference

https://pubmed.ncbi.nlm.nih.gov/15761057

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Co-overexpression of Escherichia coli RNA polymerase subunits allows isolation and analysis of mutant enzymes lacking lineage-specific sequence insertions

1 reference

https://pubmed.ncbi.nlm.nih.gov/15761057

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of the sigma subunit of Escherichia coli RNA polymerase in initiation. II. Release of sigma from ternary complexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15761057

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleation of RNA chain formation by Escherichia coli DNA-dependent RNA polymerase

1 reference

https://pubmed.ncbi.nlm.nih.gov/15761057

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.0409850102

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15761057%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

2005PNAS..102.4488N

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PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15761057%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15761057%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

ResearchGate publication ID

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