(Q33940208)

30 July 2017

title

Unusually wide co-factor tolerance in a metalloenzyme; divalent metal ions modulate endo-exonuclease activity in T5 exonuclease (English)

1 reference

30 July 2017

S J Garforth

1

1 reference

30 July 2017

D Patel

series ordinal

2

1 reference

30 July 2017

M Feng

series ordinal

3

1 reference

30 July 2017

J R Sayers

series ordinal

4

1 reference

30 July 2017

language of work or name

English

0 references

publication date

1 July 2001

1 reference

30 July 2017

published in

Nucleic Acids Research

1 reference

30 July 2017

volume

29

1 reference

30 July 2017

issue

13

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30 July 2017

page(s)

2772-2779

1 reference

Nucleic acid duplex stability: influence of base composition on cation effects

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55779

Comparison of the 5' nuclease activities of taq DNA polymerase and its isolated nuclease domain

5 July 2018

1 reference

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Mutagenesis of conserved lysine residues in bacteriophage T5 5'-3' exonuclease suggests separate mechanisms of endo-and exonucleolytic cleavage

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55779

Identification of TaqI endonuclease active site residues by Fe2+-mediated oxidative cleavage

5 July 2018

1 reference

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The role of metals in catalysis by the restriction endonuclease BamHI

5 July 2018

1 reference

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Structure of the DNA repair and replication endonuclease and exonuclease FEN-1: coupling DNA and PCNA binding to FEN-1 activity

5 July 2018

1 reference

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The crystal structure of flap endonuclease-1 from Methanococcus jannaschii

5 July 2018

1 reference

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Flexible loops and helical arches

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55779

Structure-specific DNA binding by bacteriophage T5 5'-->3' exonuclease.

5 July 2018

1 reference

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Prokaryotic 5'-3' exonucleases share a common core structure with gamma-delta resolvase.

5 July 2018

1 reference

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5 July 2018

DNA extraction by zinc

1 reference

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The FEN-1 family of structure-specific nucleases in eukaryotic DNA replication, recombination and repair

5 July 2018

1 reference

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Mechanism of tracking and cleavage of adduct-damaged DNA substrates by the mammalian 5'- to 3'-exonuclease/endonuclease RAD2 homologue 1 or flap endonuclease 1.

5 July 2018

1 reference

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Structure of bacteriophage T4 RNase H, a 5' to 3' RNA-DNA and DNA-DNA exonuclease with sequence similarity to the RAD2 family of eukaryotic proteins

5 July 2018

1 reference

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A helical arch allowing single-stranded DNA to thread through T5 5'-exonuclease

5 July 2018

1 reference

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Calf 5' to 3' exo/endonuclease must slide from a 5' end of the substrate to perform structure-specific cleavage

5 July 2018

1 reference

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Conserved sites in the 5'-3' exonuclease domain of Escherichia coli DNA polymerase

5 July 2018

1 reference

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Cobalt as probe and label of proteins

5 July 2018

1 reference

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The characterization of a mammalian DNA structure-specific endonuclease

5 July 2018

1 reference

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Crystal structure of Thermus aquaticus DNA polymerase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55779

Zinc(II) ions selectively interact with DNA sequences present at the TFIIIA binding site of theXenopus5S-RNA gene

5 July 2018

1 reference

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Salt effects on nucleic acids

5 July 2018

1 reference

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Mechanisms of error discrimination by Escherichia coli DNA polymerase I.

5 July 2018

1 reference

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Mercury-induced DNA polymorphism: probing the conformation of Hg(II)-DNA via staphylococcal nuclease digestion and circular dichroism measurements

5 July 2018

1 reference

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Properties of overexpressed phage T5 D15 exonuclease. Similarities with Escherichia coli DNA polymerase I 5'-3' exonuclease.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55779

A single-strand specific endonuclease activity copurifies with overexpressed T5 D15 exonuclease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55779

Action of Escherichia coli and human 5′ → 3′ exonuclease functions at incised apurinic/apyrimidinic sites in DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55779

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55779

The essential role of Ca2+ in the activity of bovine pancreatic deoxyribonuclease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55779

Effect of flap modifications on human FEN1 cleavage.

5 July 2018

1 reference

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Enzymological characterization of the nuclease domain from the bacterial toxin colicin E9 from Escherichia coli.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55779

Flap endonuclease homologs in archaebacteria exist as independent proteins.

29 October 2018

1 reference

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DNA cleavage by the EcoRV restriction endonuclease: pH dependence and proton transfers in catalysis

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55779

Human RAD2 homolog 1 5'- to 3'-exo/endonuclease can efficiently excise a displaced DNA fragment containing a 5'-terminal abasic lesion by endonuclease activity

29 October 2018

1 reference

12 December 2020

Creation and removal of embedded ribonucleotides in chromosomal DNA during mammalian Okazaki fragment processing

1 reference

12 December 2020

The deoxyribonucleases of Escherichia coli. VII. A deoxyribonuclease induced by infection with phage T-5

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12 December 2020

Structure-specific endonucleolytic cleavage of nucleic acids by eubacterial DNA polymerases

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12 December 2020

Identifiers

DOI

10.1093/NAR/29.13.2772

1 reference

journals/nar/GarforthPFS01

30 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

30 July 2017

1 reference