Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q33940980)
Watch
English
Strand-specific deep sequencing of the transcriptome
scientific article
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
title
Strand-specific deep sequencing of the transcriptome
(English)
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
main subject
transcriptome
0 references
author
Ana Vivancos
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
Marc Güell
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
Heinz Himmelbauer
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
author name string
Juliane C Dohm
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
Luis Serrano
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
publication date
2 June 2010
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
published in
Genome Research
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
volume
20
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
page(s)
989-999
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
issue
7
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
cites work
FRT-seq: amplification-free, strand-specific transcriptome sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
A single-base resolution map of an archaeal transcriptome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
A simple method for directional transcriptome sequencing using Illumina technology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Direct RNA sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Digital transcriptome profiling using selective hexamer priming for cDNA synthesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Transcriptome analysis by strand-specific sequencing of complementary DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Chimeric transcript discovery by paired-end transcriptome sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Prevalence of transcription promoters within archaeal operons and coding sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
The Listeria transcriptional landscape from saprophytism to virulence.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
mRNA-Seq whole-transcriptome analysis of a single cell
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Divergent transcription from active promoters
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
The antisense transcriptomes of human cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
A large genome center's improvements to the Illumina sequencing system
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
RNA-Seq: a revolutionary tool for transcriptomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Accurate whole human genome sequencing using reversible terminator chemistry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Transcriptome content and dynamics at single-nucleotide resolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
S-box and T-box riboswitches and antisense RNA control a sulfur metabolic operon of Clostridium acetobutylicum
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Mapping short DNA sequencing reads and calling variants using mapping quality scores
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Substantial biases in ultra-short read data sets from high-throughput DNA sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Characterizing the mouse ES cell transcriptome with Illumina sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Stem cell transcriptome profiling via massive-scale mRNA sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Mapping and quantifying mammalian transcriptomes by RNA-Seq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
The transcriptional landscape of the yeast genome defined by RNA sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Highly integrated single-base resolution maps of the epigenome in Arabidopsis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Construction of small RNA cDNA libraries for deep sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Modulating the outer membrane with small RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Alternative splicing and RNA selection pressure--evolutionary consequences for eukaryotic genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Antisense transcription in the mammalian transcriptome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Transcript copy number estimation using a mouse whole-genome oligonucleotide microarray.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Transcriptional analysis of the conserved ftsZ gene cluster in Mycoplasma genitalium and Mycoplasma pneumoniae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Applications of DNA tiling arrays for whole-genome analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Antisense starts making more sense
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Widespread occurrence of antisense transcription in the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Re-annotating the Mycoplasma pneumoniae genome sequence: adding value, function and reading frames.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Antisense RNA control in bacteria, phages, and plasmids
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Plasmid ColE1 incompatibility determined by interaction of RNA I with primer transcript
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Nucleotide sequencing of 5' and 3' termini of bovine viral diarrhea virus by RNA ligation and PCR
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
5 July 2018
Transcript mapping with high-density oligonucleotide tiling arrays.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
29 October 2018
Transcriptome Complexity in a Genome-Reduced Bacterium
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892100
retrieved
29 October 2018
Identifiers
DOI
10.1101/GR.094318.109
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
PMCID
2892100
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
PubMed ID
20519413
1 reference
stated in
Europe PubMed Central
PMCID
2892100
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 February 2020
ResearchGate publication ID
44646002
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit