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Evaluation of the Consensus of Four Peptide Identification Algorithms for Tandem Mass Spectrometry Based Proteomics.
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
title
Evaluation of the Consensus of Four Peptide Identification Algorithms for Tandem Mass Spectrometry Based Proteomics
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
main subject
algorithm
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author
Ruben K. Dagda
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
James Lyons-Weiler
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
author name string
Tamanna Sultana
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
publication date
1 February 2010
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
published in
Journal of Proteomics and Bioinformatics
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
volume
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
page(s)
39-47
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
cites work
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
Optimization of the Use of Consensus Methods for the Detection and Putative Identification of Peptides via Mass Spectrometry Using Protein Standard Mixtures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
Comparison of Mascot and X!Tandem performance for low and high accuracy mass spectrometry and the development of an adjusted Mascot threshold
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
Comparative evaluation of tandem MS search algorithms using a target-decoy search strategy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
Large scale analysis of MASCOT results using a Mass Accuracy-based THreshold (MATH) effectively improves data interpretation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
An evaluation, comparison, and accurate benchmarking of several publicly available MS/MS search algorithms: sensitivity and specificity analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
Large-scale database searching using tandem mass spectra: looking up the answer in the back of the book
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
Improving reproducibility and sensitivity in identifying human proteins by shotgun proteomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
OLAV-PMF: a novel scoring scheme for high-throughput peptide mass fingerprinting
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
Evaluation of algorithms for protein identification from sequence databases using mass spectrometry data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
TANDEM: matching proteins with tandem mass spectra
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
A statistical model for identifying proteins by tandem mass spectrometry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
OLAV: towards high-throughput tandem mass spectrometry data identification
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
Probability-based validation of protein identifications using a modified SEQUEST algorithm
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
SCOPE: a probabilistic model for scoring tandem mass spectra against a peptide database.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
Probability-based protein identification by searching sequence databases using mass spectrometry data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
5 July 2018
The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
29 October 2018
Qscore: an algorithm for evaluating SEQUEST database search results
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892992
retrieved
29 October 2018
Identifiers
DOI
10.4172/JPB.1000119
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
PMC publication ID
2892992
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
PubMed publication ID
20589240
1 reference
stated in
Europe PubMed Central
PMC publication ID
2892992
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20589240%20AND%20SRC:MED&resulttype=core&format=json
retrieved
6 February 2020
ResearchGate publication ID
44853188
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