(Q33972978)

30 July 2017

title

IsoformEx: isoform level gene expression estimation using weighted non-negative least squares from mRNA-Seq data (English)

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30 July 2017

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Hyunsoo Kim

1

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30 July 2017

Yingtao Bi

2

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30 July 2017

Sharmistha Pal

3

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30 July 2017

Ravi Gupta

4

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30 July 2017

Ramana V Davuluri

5

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30 July 2017

publication date

27 July 2011

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30 July 2017

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30 July 2017

volume

12

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30 July 2017

page(s)

305

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https://scigraph.springernature.com/pub.10.1186/1471-2105-12-305

30 July 2017

exact match

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cites work

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A two-parameter generalized Poisson model to improve the analysis of RNA-seq data

5 July 2018

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Towards reliable isoform quantification using RNA-SEQ data

5 July 2018

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

5 July 2018

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Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

5 July 2018

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Detection of splice junctions from paired-end RNA-seq data by SpliceMap.

5 July 2018

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Global and unbiased detection of splice junctions from RNA-seq data

5 July 2018

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Fast and SNP-tolerant detection of complex variants and splicing in short reads

5 July 2018

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A statistical method for the detection of alternative splicing using RNA-seq

5 July 2018

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RNA-Seq gene expression estimation with read mapping uncertainty

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

1 reference

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5 July 2018

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A hierarchical Bayesian model for comparing transcriptomes at the individual transcript isoform level

5 July 2018

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5 July 2018

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TopHat: discovering splice junctions with RNA-Seq

5 July 2018

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

5 July 2018

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Statistical inferences for isoform expression in RNA-Seq

5 July 2018

1 reference

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Pre-mRNA processing reaches back to transcription and ahead to translation

5 July 2018

1 reference

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Determination of tag density required for digital transcriptome analysis: application to an androgen-sensitive prostate cancer model

5 July 2018

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5 July 2018

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Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

5 July 2018

1 reference

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Alternative isoform regulation in human tissue transcriptomes

5 July 2018

1 reference

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A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome

5 July 2018

1 reference

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Stem cell transcriptome profiling via massive-scale mRNA sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3180389

Mapping and quantifying mammalian transcriptomes by RNA-Seq

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3180389

The functional consequences of alternative promoter use in mammalian genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3180389

5 July 2018

Identifiers

DOI

10.1186/1471-2105-12-305

1 reference

30 July 2017

DBLP publication ID

journals/bmcbi/KimBPGD11

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

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1 reference

30 July 2017

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