(Q33974538)

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The quaternary structure of the Saccharomyces cerevisiae succinate dehydrogenase. Homology modeling, cofactor docking, and molecular dynamics simulation studies

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scholarly article

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Europe PubMed Central

PubMed publication ID

30 July 2017

The quaternary structure of the Saccharomyces cerevisiae succinate dehydrogenase. Homology modeling, cofactor docking, and molecular dynamics simulation studies (English)

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Saccharomyces cerevisiae

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based on heuristic

inferred from title

author name string

Kayode S Oyedotun

1

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Bernard D Lemire

2

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Europe PubMed Central

PubMed publication ID

30 July 2017

language of work or name

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publication date

12 December 2003

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Europe PubMed Central

PubMed publication ID

30 July 2017

Journal of Biological Chemistry

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Europe PubMed Central

PubMed publication ID

30 July 2017

279

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Europe PubMed Central

PubMed publication ID

30 July 2017

10

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

9424-9431

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Succinate dehydrogenase and fumarate reductase from Escherichia coli

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Succinate: quinone oxidoreductases. Variations on a conserved theme

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

The Saccharomyces cerevisiae mitochondrial succinate:ubiquinone oxidoreductase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Molecular biology, biochemistry and bioenergetics of fumarate reductase, a complex membrane-bound iron-sulfur flavoenzyme of Escherichia coli

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

A structural model for the membrane-integral domain of succinate: quinone oxidoreductases.

1 reference

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21 January 2018

Structure of fumarate reductase from Wolinella succinogenes at 2.2 A resolution

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Structure of the Escherichia coli fumarate reductase respiratory complex

1 reference

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21 January 2018

Architecture of succinate dehydrogenase and reactive oxygen species generation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Analyzing your complexes: structure of the quinol-fumarate reductase respiratory complex

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Mutations in SDHD, a mitochondrial complex II gene, in hereditary paraganglioma

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Mutation of a nuclear succinate dehydrogenase gene results in mitochondrial respiratory chain deficiency

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Inborn errors of complex II--unusual human mitochondrial diseases

1 reference

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21 January 2018

A mutation in succinate dehydrogenase cytochrome b causes oxidative stress and ageing in nematodes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

The Saccharomyces cerevisiae succinate-ubiquinone reductase contains a stoichiometric amount of cytochrome b562.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

The Quinone-binding sites of the Saccharomyces cerevisiae succinate-ubiquinone oxidoreductase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

The carboxyl terminus of the Saccharomyces cerevisiae succinate dehydrogenase membrane subunit, SDH4p, is necessary for ubiquinone reduction and enzyme stability.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Modeling of loops in protein structures

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Comparative protein structure modeling of genes and genomes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Comparative protein modelling by satisfaction of spatial restraints

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Protein modelling for all

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Protein structure computing in the genomic era.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

GROMACS: A message-passing parallel molecular dynamics implementation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

GROMACS 3.0: a package for molecular simulation and trajectory analysis

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Automatic generation of 3D-atomic coordinates for organic molecules

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Automated docking of flexible ligands: applications of AutoDock

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Automated docking of substrates to proteins by simulated annealing

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

PROCHECK: a program to check the stereochemical quality of protein structures

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Stereochemical quality of protein structure coordinates

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Inhibitor probes of the quinone binding sites of mammalian complex II and Escherichia coli fumarate reductase.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Structural basis for the oxidation of thiosulfate by a sulfur cycle enzyme

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Structure of a cytochrome P450-redox partner electron-transfer complex

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

The ubiquinone-binding site of the Saccharomyces cerevisiae succinate-ubiquinone oxidoreductase is a source of superoxide

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

A defect in the cytochrome b large subunit in complex II causes both superoxide anion overproduction and abnormal energy metabolism in Caenorhabditis elegans

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Natural engineering principles of electron tunnelling in biological oxidation-reduction

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Molecular dynamics with coupling to an external bath

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Novel knowledge-based mean force potential at atomic level

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Distributed automated docking of flexible ligands to proteins: Parallel applications of AutoDock 2.4

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M311876200

21 January 2018

Identifiers

10.1074/JBC.M311876200

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

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