(Q33978841)

30 July 2017

title

Genome-wide protein localization prediction strategies for gram negative bacteria (English)

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30 July 2017

main subject

Gram-negative bacteria

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author

Margaret F Romine

series ordinal

1

1 reference

30 July 2017

language of work or name

English

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publication date

15 June 2011

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30 July 2017

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30 July 2017

volume

12 Suppl 1

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30 July 2017

page(s)

S1

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Economical Evolution: Microbes Reduce the Synthetic Cost of Extracellular Proteins

30 July 2017

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Assembly factor Omp85 recognizes its outer membrane protein substrates by a species-specific C-terminal motif

5 July 2018

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The unusual extended signal peptide region of the type V secretion system is phylogenetically restricted

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

1 reference

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Comparative analysis of differentially expressed genes in Shewanella oneidensis MR-1 following exposure to UVC, UVB, and UVA radiation

5 July 2018

1 reference

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Export of complex cofactor-containing proteins by the bacterial Tat pathway

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223724

Type I secretion in gram-negative bacteria.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223724

Peptide signal molecules and bacteriocins in Gram-negative bacteria: a genome-wide in silico screening for peptides containing a double-glycine leader sequence and their cognate transporters.

5 July 2018

1 reference

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Improved prediction of signal peptides: SignalP 3.0

5 July 2018

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Genetic identification of a respiratory arsenate reductase

5 July 2018

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Prediction of lipoprotein signal peptides in Gram-negative bacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223724

Dissimilatory Fe(III) and Mn(IV) reduction by Shewanella putrefaciens requires ferE, a homolog of the pulE (gspE) type II protein secretion gene

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223724

Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223724

Solubilization of the Cytoplasmic Membrane of Escherichia coli by the Ionic Detergent Sodium-Lauryl Sarcosinate

5 July 2018

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5 July 2018

Lipoproteins in bacteria

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5 July 2018

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The protein sequence responsible for lipoprotein membrane localization in Escherichia coli exhibits remarkable specificity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223724

Localization of cytochromes to the outer membrane of anaerobically grown Shewanella putrefaciens MR-1

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223724

A novel filamentous phage from the deep-sea bacterium Shewanella piezotolerans WP3 is induced at low temperature

5 July 2018

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21 January 2018

Bacteriophage genomics

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Discrimination of intracellular and extracellular proteins using amino acid composition and residue-pair frequencies.

21 January 2018

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Adaptation of protein secretion to extremely high-salt conditions by extensive use of the twin-arginine translocation pathway

21 January 2018

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TAT-pathway-dependent lipoproteins as a niche-based adaptation in prokaryotes

21 January 2018

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Trypsin cleaves exclusively C-terminal to arginine and lysine residues

21 January 2018

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https://api.crossref.org/works/10.1186%2F1471-2164-12-S1-S1

The proteomics of N-terminal methionine cleavage.

21 January 2018

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Substrate specificity of aminopeptidase P from Escherichia coli: comparison with membrane-bound forms from rat and bovine lung.

21 January 2018

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https://api.crossref.org/works/10.1186%2F1471-2164-12-S1-S1

Amino acids at positions 3 and 4 determine the membrane specificity of Pseudomonas aeruginosa lipoproteins.

21 January 2018

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Extracytoplasmic proteins of Mycobacterium tuberculosis - mature secreted proteins often start with aspartic acid and proline.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223724

Prediction of signal peptides and signal anchors by a hidden Markov model.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223724

Co-translocation of a Periplasmic Enzyme Complex by a Hitchhiker Mechanism through the Bacterial Tat Pathway

29 October 2018

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https://api.crossref.org/works/10.1186%2F1471-2164-12-S1-S1

Carboxy-terminal phenylalanine is essential for the correct assembly of a bacterial outer membrane protein

21 January 2018

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12 December 2020

Phages will out: strategies of host cell lysis

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12 December 2020

The pros and cons of peptide-centric proteomics

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12 December 2020

Identification of two regions of Klebsiella oxytoca pullulanase that together are capable of promoting beta-lactamase secretion by the general secretory pathway

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12 December 2020

10.1186/1471-2164-12-S1-S1

Identifiers

DOI

1 reference

Dimensions Publication ID

30 July 2017

0 references

1 reference

30 July 2017

1 reference