(Q33999368)

30 July 2017

title

Aquarium nitrification revisited: Thaumarchaeota are the dominant ammonia oxidizers in freshwater aquarium biofilters (English)

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30 July 2017

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6

Josh D Neufeld

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30 July 2017

2

Katja Engel

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30 July 2017

Laura A Sauder

1

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30 July 2017

Jennifer C Stearns

series ordinal

3

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30 July 2017

Andre P Masella

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4

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30 July 2017

Richard Pawliszyn

series ordinal

5

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30 July 2017

language of work or name

English

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publication date

16 August 2011

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30 July 2017

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30 July 2017

volume

6

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30 July 2017

issue

8

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30 July 2017

page(s)

e23281

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Creative Commons Attribution 4.0 International

30 July 2017

copyright license

start time

16 August 2011

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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5 July 2018

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Ammonium availability affects the ratio of ammonia-oxidizing bacteria to ammonia-oxidizing archaea in simulated creek ecosystems

5 July 2018

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Ammonia concentration determines differential growth of ammonia-oxidising archaea and bacteria in soil microcosms

5 July 2018

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5 July 2018

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Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea

5 July 2018

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Effect of lake trophic status and rooted macrophytes on community composition and abundance of ammonia-oxidizing prokaryotes in freshwater sediments

5 July 2018

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Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic

5 July 2018

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The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria

5 July 2018

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Nitrification in terrestrial hot springs of Iceland and Kamchatka.

5 July 2018

1 reference

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Archaea dominate the ammonia-oxidizing community in the rhizosphere of the freshwater macrophyte Littorella uniflora

5 July 2018

1 reference

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Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

5 July 2018

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A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring

5 July 2018

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Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol

5 July 2018

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Nitrosomonas Nm143-like ammonia oxidizers and Nitrospira marina-like nitrite oxidizers dominate the nitrifier community in a marine aquaculture biofilm

5 July 2018

1 reference

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Low temperature decreases the phylogenetic diversity of ammonia-oxidizing archaea and bacteria in aquarium biofiltration systems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Archaea predominate among ammonia-oxidizing prokaryotes in soils

5 July 2018

1 reference

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Archaeal nitrification in the ocean

5 July 2018

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5 July 2018

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Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota

5 July 2018

1 reference

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Nitrospira-like bacteria associated with nitrite oxidation in freshwater aquaria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Composition of microbial communities in hexachlorocyclohexane (HCH) contaminated soils from Spain revealed with a habitat-specific microarray

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Isolation of an autotrophic ammonia-oxidizing marine archaeon

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

MUSCLE: multiple sequence alignment with high accuracy and high throughput

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Identification of bacteria responsible for ammonia oxidation in freshwater aquaria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Comparative analysis of nitrifying bacteria associated with freshwater and marine aquaria.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156731

Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil

5 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0023281

Ammonia-oxidizing communities in a highly aerated full-scale activated sludge bioreactor: betaproteobacterial dynamics and low relative abundance of Crenarchaea

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0023281

Abundance of amoA genes of ammonia-oxidizing archaea and bacteria in activated sludge of full-scale wastewater treatment plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0023281

Molecular and biogeochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0023281

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0023281

Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0023281

Ammonia-oxidizing bacteria and archaea grow under contrasting soil nitrogen conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0023281

Nucleic acid contamination of glycogen used in nucleic acid precipitation and assessment of linear polyacrylamide as an alternative co-precipitant

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21858055

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0023281

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30 July 2017

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30 July 2017

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