(Q34015031)

30 July 2017

title

HicA of Escherichia coli defines a novel family of translation-independent mRNA interferases in bacteria and archaea (English)

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30 July 2017

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Kenn Gerdes

4

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author name string

Mikkel G Jørgensen

series ordinal

1

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30 July 2017

Deo P Pandey

series ordinal

2

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30 July 2017

Milena Jaskolska

series ordinal

3

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30 July 2017

language of work or name

English

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publication date

5 December 2008

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30 July 2017

published in

Journal of Bacteriology

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30 July 2017

volume

191

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30 July 2017

issue

4

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30 July 2017

page(s)

1191-1199

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EcoCyc: a comprehensive view of Escherichia coli biology

30 July 2017

cites work

1 reference

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Doc of Prophage P1 Is Inhibited by Its Antitoxin Partner Phd through Fold Complementation

5 July 2018

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Bacterial addiction module toxin Doc inhibits translation elongation through its association with the 30S ribosomal subunit

5 July 2018

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MazF, an mRNA interferase, mediates programmed cell death during multicellular Myxococcus development

5 July 2018

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prlF and yhaV encode a new toxin-antitoxin system in Escherichia coli

5 July 2018

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What is the benefit to Escherichia coli of having multiple toxin-antitoxin systems in its genome?

5 July 2018

1 reference

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Global transcriptional response of Nitrosomonas europaea to chloroform and chloromethane.

5 July 2018

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5 July 2018

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A suppressor of cell death caused by the loss of sigmaE downregulates extracytoplasmic stress responses and outer membrane vesicle production in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin system in archaea and bacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Persisters: a distinct physiological state of E. coli

5 July 2018

1 reference

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Dynamic metabolic adjustments and genome plasticity are implicated in the heat shock response of the extremely thermoacidophilic archaeon Sulfolobus solfataricus

5 July 2018

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Increased persistence in Escherichia coli caused by controlled expression of toxins or other unrelated proteins

5 July 2018

1 reference

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Induction of Escherichia coli chromosomal mazEF by stressful conditions causes an irreversible loss of viability

5 July 2018

1 reference

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Toxin-antitoxin modules as bacterial metabolic stress managers

5 July 2018

1 reference

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5 July 2018

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Toxin-antitoxin loci are highly abundant in free-living but lost from host-associated prokaryotes

5 July 2018

1 reference

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Specialized persister cells and the mechanism of multidrug tolerance in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

New connections in the prokaryotic toxin-antitoxin network: relationship with the eukaryotic nonsense-mediated RNA decay system

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

MazF Cleaves Cellular mRNAs Specifically at ACA to Block Protein Synthesis in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Toxin-antitoxin loci as stress-response-elements: ChpAK/MazF and ChpBK cleave translated RNAs and are counteracted by tmRNA.

5 July 2018

1 reference

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Axe-Txe, a broad-spectrum proteic toxin-antitoxin system specified by a multidrug-resistant, clinical isolate of Enterococcus faecium

5 July 2018

1 reference

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RelE, a global inhibitor of translation, is activated during nutritional stress

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

The ratio between CcdA and CcdB modulates the transcriptional repression of the ccd poison-antidote system

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Resuming translation on tmRNA: a unique mode of determining a reading frame

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Evolution of the major pilus gene cluster of Haemophilus influenzae.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

An Escherichia coli chromosomal "addiction module" regulated by guanosine [corrected] 3',5'-bispyrophosphate: a model for programmed bacterial cell death

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

chpA and chpB, Escherichia coli chromosomal homologs of the pem locus responsible for stable maintenance of plasmid R100

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

High concentrations of ppGpp decrease the RNA chain growth rate. Implications for protein synthesis and translational fidelity during amino acid starvation in Escherichia coli.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Cell killing by the F plasmid CcdB protein involves poisoning of DNA-topoisomerase II complexes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Control of segregation of chromosomal DNA by sex factor F in Escherichia coli. Mutants of DNA gyrase subunit A suppress letD (ccdB) product growth inhibition

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

A linear pentapeptide is a quorum-sensing factor required for mazEF-mediated cell death in Escherichia coli.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Chromosomal toxin-antitoxin loci can diminish large-scale genome reductions in the absence of selection

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Escherichia coli dinJ-yafQ genes act as a toxin-antitoxin module.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Conformational change in the catalytic site of the ribonuclease YoeB toxin by YefM antitoxin.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Crystal structure of archaeal toxin-antitoxin RelE-RelB complex with implications for toxin activity and antitoxin effects.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Delayed-relaxed response explained by hyperactivation of RelE.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

RelE toxins from bacteria and Archaea cleave mRNAs on translating ribosomes, which are rescued by tmRNA.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

ParE toxin encoded by the broad-host-range plasmid RK2 is an inhibitor of Escherichia coli gyrase

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Charging levels of four tRNA species in Escherichia coli Rel(+) and Rel(-) strains during amino acid starvation: a simple model for the effect of ppGpp on translational accuracy.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

Identification of the sigma E subunit of Escherichia coli RNA polymerase: a second alternate sigma factor involved in high-temperature gene expression

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2631989

The Escherichia coli relBE genes belong to a new toxin-antitoxin gene family

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19060138

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The Bacterial Toxin RelE Displays Codon-Specific Cleavage of mRNAs in the Ribosomal A Site

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19060138

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/JB.01013-08

1 reference

30 July 2017

1 reference

30 July 2017

1 reference