(Q34028231)

30 July 2017

Utility and distribution of conserved noncoding sequences in the grasses (English)

1 reference

30 July 2017

5

Michael Freeling

1 reference

30 July 2017

Nicholas J Kaplinsky

1

1 reference

30 July 2017

David M Braun

series ordinal

2

1 reference

30 July 2017

Jon Penterman

series ordinal

3

1 reference

30 July 2017

Stephen A Goff

series ordinal

4

1 reference

30 July 2017

language of work or name

English

0 references

publication date

23 April 2002

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

5

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

30 July 2017

99

1 reference

30 July 2017

6147-6151

1 reference

30 July 2017

9

1 reference

Enrichment of regulatory signals in conserved non-coding genomic sequence

30 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

A computational approach to identify genes for functional RNAs in genomic sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Grasses as a single genetic system: reassessment 2001

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

VISTA : visualizing global DNA sequence alignments of arbitrary length

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Long-range comparison of human and mouse SCL loci: localized regions of sensitivity to restriction endonucleases correspond precisely with peaks of conserved noncoding sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Active conservation of noncoding sequences revealed by three-way species comparisons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Conserved noncoding sequences are reliable guides to regulatory elements.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Genome relationships: the grass model in current research

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

PipMaker--a web server for aligning two genomic DNA sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Identification of a Coordinate Regulator of Interleukins 4, 13, and 5 by Cross-Species Sequence Comparisons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Comparison of five methods for finding conserved sequences in multiple alignments of gene regulatory regions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Regulatory elements and expression profiles

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Importance of anchor genomes for any plant genome project.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Comparative genetics in the grasses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Eukaryotic promoter recognition

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

A maize zinc-finger protein binds the prolamin box in zein gene promoters and interacts with the basic leucine zipper transcriptional activator Opaque2.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Molecular machines that control genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Nucleotide sequence of a B1 hordein gene and the identification of possible upstream regulatory elements in endosperm storage protein genes from barley, wheat and maize

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

The liguleless-1 gene acts tissue specifically in maize leaf development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Division and differentiation during normal and liguleless-1 maize leaf development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

An efficient cis-element discovery method using multiple sequence comparisons based on evolutionary relationships.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052139599

liguleless1 encodes a nuclear-localized protein required for induction of ligules and auricles during maize leaf organogenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052139599

A Comparison of the Celera and Ensembl Predicted Gene Sets Reveals Little Overlap in Novel Genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052139599

Comparative sequence analysis of a gene-rich cluster at human chromosome 12p13 and its syntenic region in mouse chromosome 6.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122917

Evolutionary History of the Grasses

29 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052139599

Comparative genome analysis delimits a chromosomal domain and identifies key regulatory elements in the alpha globin cluster

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052139599

Convergent domestication of cereal crops by independent mutations at corresponding genetic Loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052139599

Sectors of liguleless-1 tissue interrupt an inductive signal during maize leaf development

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052139599

Long Human–Mouse Sequence Alignments Reveal Novel Regulatory Elements: A Reason to Sequence the Mouse Genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052139599

21 January 2018

Identifiers

DOI

10.1073/PNAS.052139599

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference