(Q34030344)

30 July 2017

title

SoMART: a web server for plant miRNA, tasiRNA and target gene analysis (English)

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30 July 2017

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3

Barbara Baker

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30 July 2017

Feng Li

1

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30 July 2017

Ryan Orban

series ordinal

2

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30 July 2017

publication date

8 March 2012

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30 July 2017

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30 July 2017

volume

70

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30 July 2017

issue

5

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30 July 2017

page(s)

891-901

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CleaveLand: a pipeline for using degradome data to find cleaved small RNA targets

30 July 2017

cites work

1 reference

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miRNAs in the biogenesis of trans-acting siRNAs in higher plants

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microRNA-directed phasing during trans-acting siRNA biogenesis in plants

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics

21 January 2018

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Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs

21 January 2018

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Widespread translational inhibition by plant miRNAs and siRNAs

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MicroRNA metabolism in plants

21 January 2018

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22-Nucleotide RNAs trigger secondary siRNA biogenesis in plants

21 January 2018

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Post-transcriptional gene regulation of salinity and drought responses by plant microRNAs

21 January 2018

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Unique functionality of 22-nt miRNAs in triggering RDR6-dependent siRNA biogenesis from target transcripts in Arabidopsis

21 January 2018

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psRNATarget: a plant small RNA target analysis server

21 January 2018

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The RNA-binding proteins HYL1 and SE promote accurate in vitro processing of pri-miRNA by DCL1.

21 January 2018

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Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends

21 January 2018

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A link between RNA metabolism and silencing affecting Arabidopsis development.

21 January 2018

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Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica

21 January 2018

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MiPred: classification of real and pseudo microRNA precursors using random forest prediction model with combined features

21 January 2018

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P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction

21 January 2018

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The role of Mediator in small and long noncoding RNA production in Arabidopsis thaliana.

21 January 2018

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Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs

21 January 2018

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MicroRNA regulation of plant innate immune receptors.

21 January 2018

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How to usefully compare homologous plant genes and chromosomes as DNA sequences

21 January 2018

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Computational methods for comparative analysis of plant small RNAs.

21 January 2018

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MicroRNA maturation and action--the expanding roles of ARGONAUTEs

21 January 2018

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DIANA-microT web server: elucidating microRNA functions through target prediction

21 January 2018

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Graft-transmissible induction of potato tuberization by the microRNA miR172.

21 January 2018

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Criteria for annotation of plant MicroRNAs

21 January 2018

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Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening

21 January 2018

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The regulatory activity of microRNA* species has substantial influence on microRNA and 3' UTR evolution

21 January 2018

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CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana

21 January 2018

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A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana

21 January 2018

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Fast and effective prediction of microRNA/target duplexes

21 January 2018

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Regulation and functional specialization of small RNA-target nodes during plant development

21 January 2018

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Specific Effects of MicroRNAs on the Plant Transcriptome

21 January 2018

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RNA secondary structural determinants of miRNA precursor processing in Arabidopsis.

21 January 2018

1 reference

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The nuclear dsRNA binding protein HYL1 is required for microRNA accumulation and plant development, but not posttranscriptional transgene silencing

21 January 2018

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The product of the tobacco mosaic virus resistance gene N: similarity to toll and the interleukin-1 receptor

21 January 2018

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The N gene of tobacco confers resistance to tobacco mosaic virus in transgenic tomato

21 January 2018

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Identification, characterization and expression analysis of MicroRNAs and their targets in the potato (Solanum tuberosum)

21 January 2018

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Genome sequence and analysis of the tuber crop potato

21 January 2018

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A cluster of disease resistance genes in Arabidopsis is coordinately regulated by transcriptional activation and RNA silencing

21 January 2018

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miRU: an automated plant miRNA target prediction server

21 January 2018

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Arabidopsis Argonaute 2 regulates innate immunity via miRNA393(∗)-mediated silencing of a Golgi-localized SNARE gene, MEMB12

21 January 2018

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Genome-wide double-stranded RNA sequencing reveals the functional significance of base-paired RNAs in Arabidopsis

21 January 2018

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Mfold web server for nucleic acid folding and hybridization prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.04922.X

10.1111/J.1365-313X.2012.04922.X

21 January 2018

Identifiers

DOI

1 reference

30 July 2017

1 reference