(Q34031538)

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Comparative SNP and haplotype analysis reveals a higher genetic diversity and rapider LD decay in tropical than temperate germplasm in maize

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scholarly article

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Europe PubMed Central

PubMed publication ID

30 July 2017

Comparative SNP and haplotype analysis reveals a higher genetic diversity and rapider LD decay in tropical than temperate germplasm in maize (English)

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Europe PubMed Central

PubMed publication ID

30 July 2017

genetic diversity

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inferred from title

object named as

Trushar Shah

2

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author name string

Yanli Lu

1

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Europe PubMed Central

PubMed publication ID

30 July 2017

Zhuanfang Hao

3

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Europe PubMed Central

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30 July 2017

Suketoshi Taba

4

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Europe PubMed Central

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30 July 2017

Shihuang Zhang

5

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Europe PubMed Central

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30 July 2017

Shibin Gao

6

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30 July 2017

Jian Liu

7

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Europe PubMed Central

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30 July 2017

Moju Cao

8

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Europe PubMed Central

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30 July 2017

Jing Wang

9

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30 July 2017

A Bhanu Prakash

10

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30 July 2017

Tingzhao Rong

11

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30 July 2017

Yunbi Xu

12

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30 July 2017

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publication date

15 September 2011

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30 July 2017

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Europe PubMed Central

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30 July 2017

6

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Europe PubMed Central

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30 July 2017

9

1 reference

Europe PubMed Central

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30 July 2017

e24861

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

copyright license

Creative Commons Attribution 4.0 International

15 September 2011

1 reference

April 2022 Public Data File from Crossref

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A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

1 reference

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5 July 2018

Genetic association mapping identifies single nucleotide polymorphisms in genes that affect abscisic acid levels in maize floral tissues during drought

1 reference

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5 July 2018

Joint linkage-linkage disequilibrium mapping is a powerful approach to detecting quantitative trait loci underlying drought tolerance in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174237

5 July 2018

Genome-wide patterns of genetic variation among elite maize inbred lines

1 reference

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5 July 2018

Population structure and genetic diversity in a commercial maize breeding program assessed with SSR and SNP markers

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5 July 2018

Genetic characterization and linkage disequilibrium estimation of a global maize collection using SNP markers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174237

5 July 2018

A first-generation haplotype map of maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174237

5 July 2018

Molecular characterization of global maize breeding germplasm based on genome-wide single nucleotide polymorphisms

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TASSEL: software for association mapping of complex traits in diverse samples

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Illumina universal bead arrays

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A graphical assessment of p-values from sliding window haplotype tests of association to identify asthma susceptibility loci on chromosome 11q.

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5 July 2018

Genetic association mapping and genome organization of maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174237

5 July 2018

Haplotype-sharing analysis using Mantel statistics for combined genetic effects

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174237

5 July 2018

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174237

5 July 2018

Evolution of DNA sequence nonhomologies among maize inbreds

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174237

5 July 2018

Long-range patterns of diversity and linkage disequilibrium surrounding the maize Y1 gene are indicative of an asymmetric selective sweep

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174237

5 July 2018

Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites

1 reference

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5 July 2018

Structure of linkage disequilibrium in plants

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174237

5 July 2018

Nonparametric disequilibrium mapping of functional sites using haplotypes of multiple tightly linked single-nucleotide polymorphism markers.

1 reference

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5 July 2018

Gene expression of a gene family in maize based on noncollinear haplotypes

1 reference

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5 July 2018

Haplotype analysis in population genetics and association studies

1 reference

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5 July 2018

Intraspecific violation of genetic colinearity and its implications in maize

1 reference

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5 July 2018

Structure of linkage disequilibrium and phenotypic associations in the maize genome

1 reference

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5 July 2018

Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp. mays L.).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174237

5 July 2018

Insertional polymorphism in introns 4 and 10 of the maize beta-glucosidase gene glu1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174237

5 July 2018

The neighbor-joining method: a new method for reconstructing phylogenetic trees

1 reference

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5 July 2018

Basic local alignment search tool

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5 July 2018

Polymorphism of PCR-based markers targeting exons, introns, promoter regions, and SSRs in maize and introns and repeat sequences in oat.

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21 January 2018

Status and Prospects of Association Mapping in Plants

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21 January 2018

PowerMarker: an integrated analysis environment for genetic marker analysis

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21 January 2018

Genetic Diversity in CIMMYT Nontemperate Maize Germplasm: Landraces, Open Pollinated Varieties, and Inbred Lines

1 reference

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21 January 2018

Linkage disequilibrium and sequence diversity in a 500-kbp region around the adh1 locus in elite maize germplasm

1 reference

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12 December 2020

based on heuristic

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Linkage disequilibrium in European elite maize germplasm investigated with SSRs

1 reference

https://pubmed.ncbi.nlm.nih.gov/21949770

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inferring genome ancestry and estimating molecular relatedness among 187 Chinese maize inbred lines

1 reference

https://pubmed.ncbi.nlm.nih.gov/21949770

12 December 2020

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Population structure and linkage disequilibrium of a mini core set of maize inbred lines in China

1 reference

https://pubmed.ncbi.nlm.nih.gov/21949770

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0024861

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

2011PLoSO...624861L

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

ResearchGate publication ID

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