(Q34031643)

English

Tidying up international nucleotide sequence databases: ecological, geographical and sequence quality annotation of its sequences of mycorrhizal fungi

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scholarly article

1 reference

Europe PubMed Central

30 July 2017

Tidying up international nucleotide sequence databases: ecological, geographical and sequence quality annotation of its sequences of mycorrhizal fungi (English)

1 reference

Europe PubMed Central

30 July 2017

1 reference

based on heuristic

inferred from title

mycorrhizal fungus

1 reference

based on heuristic

inferred from title

Kessy Abarenkov

2

1 reference

Europe PubMed Central

30 July 2017

Rolf Henrik Nilsson

3

1 reference

Europe PubMed Central

30 July 2017

13

object named as

Urmas Kõljalg

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object named as

Petr Kohout

6

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1

object named as

Leho Tedersoo

1 reference

Europe PubMed Central

30 July 2017

10

object named as

Teele Jairus

1 reference

Europe PubMed Central

30 July 2017

Karl-Henrik Larsson

12

object named as

Karl-Henrik Larsson

1 reference

Europe PubMed Central

30 July 2017

11

object named as

Martin Ryberg

1 reference

Europe PubMed Central

30 July 2017

Arthur Schüssler

4

object named as

Arthur Schüssler

1 reference

Europe PubMed Central

30 July 2017

7

object named as

Jane Oja

1 reference

Europe PubMed Central

30 July 2017

9

object named as

Vilmar Veldre

1 reference

Europe PubMed Central

30 July 2017

author name string

Gwen-Aëlle Grelet

5

1 reference

Europe PubMed Central

30 July 2017

Gregory M Bonito

8

1 reference

Europe PubMed Central

30 July 2017

language of work or name

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publication date

15 September 2011

1 reference

Europe PubMed Central

30 July 2017

1 reference

Europe PubMed Central

30 July 2017

6

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Europe PubMed Central

30 July 2017

9

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Europe PubMed Central

30 July 2017

e24940

1 reference

Europe PubMed Central

30 July 2017

copyright license

Creative Commons Attribution 4.0 International

15 September 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

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maintained by WikiProject

WikiProject Ecology

1 reference

based on heuristic

inferred from title

Diverse Helotiales associated with the roots of three species of Arctic Ericaceae provide no evidence for host specificity

1 reference

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Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

1 reference

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Cyber infrastructure for Fusarium: three integrated platforms supporting strain identification, phylogenetics, comparative genomics and knowledge sharing

1 reference

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A global meta-analysis of Tuber ITS rDNA sequences: species diversity, host associations and long-distance dispersal

1 reference

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The online database MaarjAM reveals global and ecosystemic distribution patterns in arbuscular mycorrhizal fungi (Glomeromycota).

1 reference

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5 July 2018

DNA barcoding of arbuscular mycorrhizal fungi

1 reference

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Current state and perspectives of fungal DNA barcoding and rapid identification procedures

1 reference

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Ectomycorrhizal lifestyle in fungi: global diversity, distribution, and evolution of phylogenetic lineages

1 reference

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Fungal diversity in deep-sea hydrothermal ecosystems

1 reference

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Functional and genetic diversity of mycorrhizal fungi from single plants of Caladenia formosa (Orchidaceae).

1 reference

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5 July 2018

'Glomus intraradices DAOM197198', a model fungus in arbuscular mycorrhiza research, is not Glomus intraradices.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

The ITS region as a target for characterization of fungal communities using emerging sequencing technologies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

A rapid bootstrap algorithm for the RAxML Web servers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

Mining metadata from unidentified ITS sequences in GenBank: a case study in Inocybe (Basidiomycota).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

Global patterns in bacterial diversity

1 reference

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5 July 2018

Sebacinales are common mycorrhizal associates of Ericaceae

1 reference

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5 July 2018

Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

Fungal community analysis by large-scale sequencing of environmental samples

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

Approaching the taxonomic affiliation of unidentified sequences in public databases--an example from the mycorrhizal fungi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

PHYML Online--a web server for fast maximum likelihood-based phylogenetic inference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

Diversity and classification of mycorrhizal associations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

5 July 2018

Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174234

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The UNITE database for molecular identification of fungi--recent updates and future perspectives.

1 reference

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21 January 2018

An outlook on the fungal internal transcribed spacer sequences in GenBank and the introduction of a web-based tool for the exploration of fungal diversity.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0024940

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An open source chimera checker for the fungal ITS region

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0024940

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DNA data. Proposal to 'Wikify' GenBank meets stiff resistance

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0024940

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Using heterozygosity to estimate a percentage DNA sequence similarity for environmental species' delimitation across basidiomycete fungi.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0024940

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Intragenomic variation of fungal ribosomal genes is higher than previously thought.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0024940

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Exploration types of ectomycorrhizae

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0024940

21 January 2018

Inoculum potential of Rhizopogon spores increases with time over the first 4 yr of a 99-yr spore burial experiment

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0024940

21 January 2018

Atractiellomycetes belonging to the 'rust' lineage (Pucciniomycotina) form mycorrhizae with terrestrial and epiphytic neotropical orchids.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0024940

21 January 2018

Can we develop general predictive models of mycorrhizal fungal community-environment relationships?

1 reference

https://pubmed.ncbi.nlm.nih.gov/21949797

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intragenomic variation in the ITS rDNA region obscures phylogenetic relationships and inflates estimates of operational taxonomic units in genus Laetiporus

1 reference

https://pubmed.ncbi.nlm.nih.gov/21949797

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0024940

1 reference

Europe PubMed Central

30 July 2017

2011PLoSO...624940T

0 references

1 reference

Europe PubMed Central

30 July 2017

1 reference

Europe PubMed Central

30 July 2017

ResearchGate publication ID

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