(Q34041814)

30 July 2017

title

DNA sequence-based subtyping and evolutionary analysis of selected Salmonella enterica serotypes (English)

1 reference

30 July 2017

0 references

9

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30 July 2017

Kathryn J Boor

8

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author name string

Sharinne Sukhnanand

1

1 reference

30 July 2017

Sam Alcaine

2

1 reference

30 July 2017

Lorin D Warnick

3

1 reference

30 July 2017

Wan-Lin Su

4

1 reference

30 July 2017

Jessica Hof

5

1 reference

30 July 2017

Mary Pat J Craver

6

1 reference

30 July 2017

Patrick McDonough

7

1 reference

30 July 2017

language of work or name

English

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publication date

1 August 2005

1 reference

Journal of Clinical Microbiology

30 July 2017

published in

1 reference

30 July 2017

volume

43

1 reference

30 July 2017

issue

8

1 reference

30 July 2017

page(s)

3688-3698

1 reference

Characterization of Salmonella enterica subspecies I genovars by use of microarrays

30 July 2017

cites work

1 reference

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Multi-locus sequence typing: a tool for global epidemiology

5 July 2018

1 reference

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Phage-based typing scheme for Salmonella enterica serovar Heidelberg, a causative agent of food poisonings in Canada

5 July 2018

1 reference

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Lateral gene transfer in Salmonella

5 July 2018

1 reference

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Multilocus sequence typing system for group B streptococcus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Multilocus sequence typing has better discriminatory ability for typing Vibrio cholerae than does pulsed-field gel electrophoresis and provides a measure of phylogenetic relatedness

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Development of a multilocus sequence typing method for analysis of Listeria monocytogenes clones

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Genomic comparison of Salmonella enterica serovars and Salmonella bongori by use of an S. enterica serovar typhimurium DNA microarray

5 July 2018

1 reference

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Rational design of DNA sequence-based strategies for subtyping Listeria monocytogenes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Subtyping of bacterial foodborne pathogens.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Multilocus sequence typing for characterization of clinical and environmental salmonella strains

5 July 2018

1 reference

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Salmonella enterica serotype Typhimurium and its host-adapted variants.

5 July 2018

1 reference

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MEGA2: molecular evolutionary genetics analysis software

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

MRBAYES: Bayesian inference of phylogenetic trees

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

5 July 2018

1 reference

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Multilocus sequence typing system for Campylobacter jejuni.

5 July 2018

1 reference

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5 July 2018

Salmonella nomenclature.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Codon-substitution models for heterogeneous selection pressure at amino acid sites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Characterization of Salmonella enterica serovar typhimurium DT104 isolated from Denmark and comparison with isolates from Europe and the United States.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

MODELTEST: testing the model of DNA substitution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

PAML: a program package for phylogenetic analysis by maximum likelihood

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

TreeView: an application to display phylogenetic trees on personal computers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

A program for calculating and displaying compatibility matrices as an aid in determining reticulate evolution in molecular sequences.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Molecular genetic basis of allelic polymorphism in malate dehydrogenase (mdh) in natural populations of Escherichia coli and Salmonella enterica

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Toward a population genetic analysis of Salmonella: genetic diversity and relationships among strains of serotypes S. choleraesuis, S. derby, S. dublin, S. enteritidis, S. heidelberg, S. infantis, S. newport, and S. typhimurium

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Clonal nature of Salmonella typhi and its genetic relatedness to other salmonellae as shown by multilocus enzyme electrophoresis, and proposal of Salmonella bongori comb. nov

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Genetic population structure, clonal phylogeny, and pathogenicity of Salmonella paratyphi B.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Evolutionary genetic relationships of clones of Salmonella serovars that cause human typhoid and other enteric fevers.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Molecular evolutionary genetics of the cattle-adapted serovar Salmonella dublin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Effect of previous antimicrobial treatment on fecal shedding of Salmonella enterica subsp. enterica serogroup B in New York dairy herds with recent clinical salmonellosis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

The changing epidemiology of salmonella: trends in serotypes isolated from humans in the United States, 1987-1997.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

The partition matrix: exploring variable phylogenetic signals along nucleotide sequence alignments

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1233967

Detection and identification of Listeria monocytogenes in cooked sausage products and in milk by in vitro amplification of haemolysin gene fragments

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16081897

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/JCM.43.8.3688-3698.2005

1 reference

30 July 2017

1 reference

30 July 2017

1 reference