(Q34055707)

English

Mainstreams of horizontal gene exchange in enterobacteria: consideration of the outbreak of enterohemorrhagic E. coli O104:H4 in Germany in 2011

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scholarly article

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Europe PubMed Central

PubMed publication ID

30 July 2017

Mainstreams of horizontal gene exchange in enterobacteria: consideration of the outbreak of enterohemorrhagic E. coli O104:H4 in Germany in 2011 (English)

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

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Escherichia coli

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Gipsi Lima-Mendez

object named as

Gipsi Lima-Mendez

4

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object named as

Oleg N Reva

5

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author name string

Oliver Bezuidt

1

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Rian Pierneef

2

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Europe PubMed Central

PubMed publication ID

30 July 2017

Kingdom Mncube

3

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

language of work or name

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publication date

14 October 2011

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Europe PubMed Central

PubMed publication ID

30 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

6

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

10

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

e25702

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

copyright license

Creative Commons Attribution 4.0 International

14 October 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

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Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology

1 reference

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Genome sequence analyses of two isolates from the recent Escherichia coli outbreak in Germany reveal the emergence of a new pathotype: Entero-Aggregative-Haemorrhagic Escherichia coli (EAHEC)

1 reference

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Virulence gene profiling of enterohemorrhagic (EHEC) and enteropathogenic (EPEC) Escherichia coli strains: a basis for molecular risk assessment of typical and atypical EPEC strains

1 reference

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1 reference

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1 reference

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1 reference

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Evolutionary diversification of an ancient gene family (rhs) through C-terminal displacement

1 reference

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1 reference

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Horizontal gene transfer of the secretome drives the evolution of bacterial cooperation and virulence.

1 reference

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Non mycobacterial virulence genes in the genome of the emerging pathogen Mycobacterium abscessus

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Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

1 reference

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Visualization of Pseudomonas genomic structure by abundant 8-14mer oligonucleotides.

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IslandViewer: an integrated interface for computational identification and visualization of genomic islands

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The fate of new bacterial genes.

1 reference

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5 July 2018

The SeqWord Genome Browser: an online tool for the identification and visualization of atypical regions of bacterial genomes through oligonucleotide usage

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Structure and genetics of Shigella O antigens

1 reference

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5 July 2018

The emergence and fate of horizontally acquired genes in Escherichia coli

1 reference

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Gene amelioration demonstrated: the journey of nascent genes in bacteria

1 reference

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Role of structural variations of polysaccharide antigens in the pathogenicity of Gram-negative bacteria.

1 reference

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5 July 2018

Bacterial pathogenomics

1 reference

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A new O-antigen gene cluster has a key role in the virulence of the Escherichia coli meningitis clone O45:K1:H7

1 reference

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Commensal and pathogenic Escherichia coli use a common pilus adherence factor for epithelial cell colonization

1 reference

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5 July 2018

Global extent of horizontal gene transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3195076

5 July 2018

Diversity of the abundant pKLC102/PAGI-2 family of genomic islands in Pseudomonas aeruginosa.

1 reference

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Towards pathogenomics: a web-based resource for pathogenicity islands

1 reference

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5 July 2018

SGI1-K, a variant of the SGI1 genomic island carrying a mercury resistance region, in Salmonella enterica serovar Kentucky

1 reference

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5 July 2018

The reach of the genome signature in prokaryotes

1 reference

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5 July 2018

The fate of laterally transferred genes: life in the fast lane to adaptation or death

1 reference

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5 July 2018

Use of artificial genomes in assessing methods for atypical gene detection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3195076

5 July 2018

Differentiation of regions with atypical oligonucleotide composition in bacterial genomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3195076

5 July 2018

Highways of gene sharing in prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3195076

5 July 2018

Mechanisms of, and barriers to, horizontal gene transfer between bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3195076

5 July 2018

A computational approach for identifying pathogenicity islands in prokaryotic genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3195076

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Verotoxigenic Escherichia coli from animals, humans and foods: who's who?

1 reference

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5 July 2018

Detection and characterization of horizontal transfers in prokaryotes using genomic signature

1 reference

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Towards more virulent and antibiotic-resistant Salmonella?

1 reference

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Large-scale population structure of human commensal Escherichia coli isolates

1 reference

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Uncultured soil bacteria are a reservoir of new antibiotic resistance genes

1 reference

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Application of tetranucleotide frequencies for the assignment of genomic fragments

1 reference

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Global features of sequences of bacterial chromosomes, plasmids and phages revealed by analysis of oligonucleotide usage patterns

1 reference

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5 July 2018

Biased biological functions of horizontally transferred genes in prokaryotic genomes

1 reference

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5 July 2018

Genomic islands in pathogenic and environmental microorganisms

1 reference

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Islander: a database of integrative islands in prokaryotic genomes, the associated integrases and their DNA site specificities

1 reference

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Prophage genomics

1 reference

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Informatics for unveiling hidden genome signatures

1 reference

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Evolutionary implications of microbial genome tetranucleotide frequency biases

1 reference

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Molecular epidemiology of the SRL pathogenicity island

1 reference

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Pervasive properties of the genomic signature

1 reference

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Sat, the secreted autotransporter toxin of uropathogenic Escherichia coli, is a vacuolating cytotoxin for bladder and kidney epithelial cells

1 reference

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Horizontal gene transfer and bacterial diversity

1 reference

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Ecological fitness, genomic islands and bacterial pathogenicity. A Darwinian view of the evolution of microbes

1 reference

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Environmental selection of antibiotic resistance genes

1 reference

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Rapid and simple determination of the Escherichia coli phylogenetic group

1 reference

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Lateral gene transfer and the nature of bacterial innovation

1 reference

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Genomic signature: characterization and classification of species assessed by chaos game representation of sequences

1 reference

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Gene transfer, speciation, and the evolution of bacterial genomes

1 reference

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Detecting alien genes in bacterial genomes

1 reference

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Horizontal gene transfer among genomes: the complexity hypothesis

1 reference

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5 July 2018

Global dinucleotide signatures and analysis of genomic heterogeneity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3195076

5 July 2018

Rhs elements comprise three subfamilies which diverged prior to acquisition by Escherichia coli

1 reference

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5 July 2018

Organization of Escherichia coli O157 O antigen gene cluster and identification of its specific genes

1 reference

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1 reference

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1 reference

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1 reference

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5 July 2018

Rhs elements of Escherichia coli: a family of genetic composites each encoding a large mosaic protein

1 reference

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5 July 2018

Dinucleotide relative abundance extremes: a genomic signature

1 reference

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Opportunistic infections with Erwinia-like species

1 reference

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1 reference

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5 July 2018

Use of the genomic signature in bacterial classification and identification

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025702

21 January 2018

Pathogenicity islands of uropathogenic E. coli and the evolution of virulence.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025702

21 January 2018

A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025702

21 January 2018

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1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025702

21 January 2018

Presence of Salmonella pathogenicity island 2 genes in seafood-associated Salmonella serovars and the role of the sseC gene in survival of Salmonella enterica serovar Weltevreden in epithelial cells.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025702

21 January 2018

Reticulate representation of evolutionary and functional relationships between phage genomes

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025702

21 January 2018

A modular view of the bacteriophage genomic space: identification of host and lifestyle marker modules

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025702

21 January 2018

Assigning Escherichia coli strains to phylogenetic groups: multi-locus sequence typing versus the PCR triplex method.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025702

21 January 2018

Prevalence and characterization of Shiga toxin-producing Escherichia coli O157 and O26 in beef farms.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025702

21 January 2018

Unusual rise in mercury-resistant bacteria in coastal environs.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025702

21 January 2018

Monitoring genome evolution ex vivo: reversible chromosomal integration of a 106 kb plasmid at two tRNA(Lys) gene loci in sequential Pseudomonas aeruginosa airway isolates.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025702

21 January 2018

Horizontal gene transfer depends on gene content of the host.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3195076

28 October 2018

Experimental methods for assaying natural transformation and inferring horizontal gene transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3195076

28 October 2018

Septicaemia caused by Erwinia herbicola in an 8-year-old boy (author's transl)

1 reference

https://pubmed.ncbi.nlm.nih.gov/22022434

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Contribution of horizontally acquired genomic islands to the evolution of the tubercle bacilli

1 reference

https://pubmed.ncbi.nlm.nih.gov/22022434

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

tRNA genes and pathogenicity islands: influence on virulence and metabolic properties of uropathogenic Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/22022434

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0025702

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

2011PLoSO...625702B

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

ResearchGate publication ID

0 references

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