(Q34063516)

30 July 2017

title

Why highly expressed proteins evolve slowly (English)

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30 July 2017

2

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30 July 2017

4

1 reference

30 July 2017

1

D Allan Drummond

1 reference

30 July 2017

5

Frances H Arnold

1 reference

30 July 2017

Christoph Adami

3

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language of work or name

English

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publication date

21 September 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

published in

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30 July 2017

volume

102

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30 July 2017

issue

40

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30 July 2017

page(s)

14338-14343

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Functional genomic analysis of the rates of protein evolution

30 July 2017

cites work

1 reference

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5 July 2018

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5 July 2018

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Gene expression intensity shapes evolutionary rates of the proteins encoded by the vertebrate genome

5 July 2018

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Protein tolerance to random amino acid change

5 July 2018

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Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae

5 July 2018

1 reference

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Protein degradation and protection against misfolded or damaged proteins

5 July 2018

1 reference

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Genome-scale approaches to resolving incongruence in molecular phylogenies

5 July 2018

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Global analysis of protein expression in yeast

5 July 2018

1 reference

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Apparent dependence of protein evolutionary rate on number of interactions is linked to biases in protein-protein interactions data sets

5 July 2018

1 reference

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Comparing protein abundance and mRNA expression levels on a genomic scale

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Translational selection and yeast proteome evolution

5 July 2018

1 reference

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Sequencing and comparison of yeast species to identify genes and regulatory elements

5 July 2018

1 reference

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Role of duplicate genes in genetic robustness against null mutations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Essential genes are more evolutionarily conserved than are nonessential genes in bacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Evolutionary rate in the protein interaction network

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Inherent toxicity of aggregates implies a common mechanism for protein misfolding diseases

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Gene expression and molecular evolution

5 July 2018

1 reference

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Yeast genome evolution in the post-genome era.

5 July 2018

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Dissecting the regulatory circuitry of a eukaryotic genome

5 July 2018

1 reference

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A genome-wide transcriptional analysis of the mitotic cell cycle

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

PAML: a program package for phylogenetic analysis by maximum likelihood

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Gratuitous overexpression of genes in Escherichia coli leads to growth inhibition and ribosome destruction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Missense misreading of asparagine codons as a function of codon identity and context

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Errors and alternatives in reading the universal genetic code.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Determinants of DNA sequence divergence between Escherichia coli and Salmonella typhimurium: codon usage, map position, and concerted evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Evolutionary processes and evolutionary noise at the molecular level. I. Functional density in proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Detecting putative orthologs.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504070102

Do essential genes evolve slowly?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504070102

Protein dispensability and rate of evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504070102

Gene expression level influences amino acid usage, but not codon usage, in the tsetse fly endosymbiont Wigglesworthia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504070102

Genomic function (communication arising): Rate of evolution and gene dispensability

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504070102

Relationship of codon bias to mRNA concentration and protein length in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504070102

Medicine: danger--misfolding proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504070102

Does the Recombination Rate Affect the Efficiency of Purifying Selection? The Yeast Genome Provides a Partial Answer

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504070102

An analysis of determinants of amino acids substitution rates in bacterial proteins

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Highly expressed genes in yeast evolve slowly.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Essential Genes Are More Evolutionarily Conserved Than Are Nonessential Genes in Bacteria

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1242296

Determinants of substitution rates in mammalian genes: expression pattern affects selection intensity but not mutation rate

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16176987

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Phylogenetic relationships among yeasts of the ? complex? determined from multigene sequence analyses

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16176987

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0504070102

1 reference

30 July 2017

0 references

1 reference

1 reference

30 July 2017

1 reference