(Q34068674)

30 July 2017

title

Analysis of two marine metagenomes reveals the diversity of plasmids in oceanic environments (English)

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30 July 2017

2

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30 July 2017

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Brian Palenik

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30 July 2017

Yingfei Ma

1

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30 July 2017

publication date

8 November 2011

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Environmental Microbiology

30 July 2017

published in

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30 July 2017

volume

14

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30 July 2017

issue

2

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30 July 2017

page(s)

453-466

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Comparative genome sequence analysis of multidrug-resistant Acinetobacter baumannii

30 July 2017

cites work

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Basic local alignment search tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Evolution and ecology of antibiotic resistance genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Virus population dynamics and acquired virus resistance in natural microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Microbiology. Variety--the splice of life--in microbial communities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Origin binding activity of the Mycobacterial plasmid pAL5000 replication protein RepB is stimulated through interactions with host factors and coupled expression of repA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Evolution of a bacteria/plasmid association

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Replication control of a small cryptic plasmid of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

The stachydrine catabolism region in Sinorhizobium meliloti encodes a multi-enzyme complex similar to the xenobiotic degrading systems in other bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

The evolution of a conjugative plasmid and its ability to increase bacterial fitness.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Bacteriophage f1 DNA replication genes. II. The roles of gene V protein and gene II protein in complementary strand synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Isolation of a new broad-host-range IncQ-like plasmid, pTC-F14, from the acidophilic bacterium Acidithiobacillus caldus and analysis of the plasmid replicon

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Plasmids from freshwater environments capable of IncQ retrotransfer are diverse and include pQKH54, a new IncP-1 subgroup archetype.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Comparative metagenomic analysis of plasmid encoded functions in the human gut microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Nucleotide sequence of plasmid pCNB1 from comamonas strain CNB-1 reveals novel genetic organization and evolution for 4-chloronitrobenzene degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

CDD: specific functional annotation with the Conserved Domain Database

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

A rolling circle replication initiator protein with a nucleotidyl-transferase activity encoded by the plasmid pGT5 from the hyperthermophilic archaeon Pyrococcus abyssi

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Complete nucleotide sequence and organization of the atrazine catabolic plasmid pADP-1 from Pseudomonas sp. strain ADP

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

RepA protein- and oriR-dependent initiation of R1 plasmid replication: identification of a rho-dependent transcription terminator required for cis-action of repA protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

chpA and chpB, Escherichia coli chromosomal homologs of the pem locus responsible for stable maintenance of plasmid R100

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

The large nonsymbiotic plasmid pRmeGR4a of Rhizobium meliloti GR4 encodes a protein involved in replication that has homology with the RepC protein of Agrobacterium plasmids

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

The Plasmid Genome Database

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Structural flexibility in the Burkholderia mallei genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Coastal Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Global ocean sampling collection

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Diversity and evolution of repABC type plasmids in Rhodobacterales

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Proteic toxin-antitoxin, bacterial plasmid addiction systems and their evolution with special reference to the pas system of pTF-FC2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Diverse circovirus-like genome architectures revealed by environmental metagenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Genetic diversity and composition of a plasmid metagenome from a wastewater treatment plant.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

The prevalence and diversity of mobile genetic elements in bacterial communities of different environmental habitats: insights gained from different methodological approaches

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Horizontal gene transfer and mobile genetic elements in marine systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Studying plasmid horizontal transfer in situ: a critical review

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

P1 plasmid replication: measurement of initiator protein concentration in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Temporal variation of Synechococcus clades at a coastal Pacific Ocean monitoring site

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Selection in coastal Synechococcus (cyanobacteria) populations evaluated from environmental metagenomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

The human microbiome project

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Community structure and metabolism through reconstruction of microbial genomes from the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Comparative analysis of Acinetobacters: three genomes for three lifestyles

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Genomic and structural analysis of Syn9, a cyanophage infecting marine Prochlorococcus and Synechococcus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Structural classification of HTH DNA-binding domains and protein-DNA interaction modes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Genetic analysis of a lactococcal plasmid replicon

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

Ab initio gene identification in metagenomic sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02633.X

10.1111/J.1462-2920.2011.02633.X

21 January 2018

Identifiers

DOI

1 reference

release_xool77m4bzcuhnokntmirjcb6q

30 July 2017

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/xool77m4bzcuhnokntmirjcb6q

mapped directly with Wikidata item

24 November 2022

based on heuristic

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