(Q34075031)

English

Rigorous and thorough bioinformatic analyses of olfactory receptor promoters confirm enrichment of O/E and homeodomain binding sites but reveal no new common motifs

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Rigorous and thorough bioinformatic analyses of olfactory receptor promoters confirm enrichment of O/E and homeodomain binding sites but reveal no new common motifs (English)

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

1 reference

based on heuristic

inferred from title

author name string

Janet M Young

1

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Ralf M Luche

2

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Barbara J Trask

3

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

language of work or name

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publication date

15 November 2011

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

12

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

561

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

High-throughput mapping of the promoters of the mouse olfactory receptor genes reveals a new type of mammalian promoter and provides insight into olfactory receptor gene regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

An epigenetic signature for monoallelic olfactory receptor expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Homeodomain binding motifs modulate the probability of odorant receptor gene choice in transgenic mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

The UCSC Genome Browser database: update 2011

1 reference

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1 reference

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1 reference

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5 July 2018

Odor coding by a Mammalian receptor repertoire

1 reference

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5 July 2018

Emx2 stimulates odorant receptor gene expression

1 reference

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Enredo and Pecan: genome-wide mammalian consistency-based multiple alignment with paralogs

1 reference

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5 July 2018

Members of the miRNA-200 family regulate olfactory neurogenesis

1 reference

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5 July 2018

Analysis of sequence conservation at nucleotide resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Deletion of the core-H region in mice abolishes the expression of three proximal odorant receptor genes in cis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Prominent roles for odorant receptor coding sequences in allelic exclusion

1 reference

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1 reference

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5 July 2018

Reliable prediction of regulator targets using 12 Drosophila genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Tissue-specific transcriptional regulation has diverged significantly between human and mouse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

PAML 4: phylogenetic analysis by maximum likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Identification of potential regulatory motifs in odorant receptor genes by analysis of promoter sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Interchromosomal interactions and olfactory receptor choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Genome-wide analysis of mammalian promoter architecture and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

MatInspector and beyond: promoter analysis based on transcription factor binding sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Continuous and overlapping expression domains of odorant receptor genes in the olfactory epithelium determine the dorsal/ventral positioning of glomeruli in the olfactory bulb.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Assessing computational tools for the discovery of transcription factor binding sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

NSCL-1 and NSCL-2 synergistically determine the fate of GnRH-1 neurons and control necdin gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Bioconductor: open software development for computational biology and bioinformatics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

The Lim homeobox gene Lhx2 is required for olfactory sensory neuron identity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Weeder Web: discovery of transcription factor binding sites in a set of sequences from co-regulated genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Gene switching and the stability of odorant receptor gene choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

The LIM-homeodomain protein Lhx2 is required for complete development of mouse olfactory sensory neurons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

A gene atlas of the mouse and human protein-encoding transcriptomes

1 reference

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5 July 2018

Aligning multiple genomic sequences with the threaded blockset aligner

1 reference

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Mice cloned from olfactory sensory neurons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

A feedback mechanism regulates monoallelic odorant receptor expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

The UCSC Table Browser data retrieval tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

The clustered olfactory receptor gene family 262: genomic organization, promotor elements, and interacting transcription factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Developmental elimination of ectopic projection sites for the transgenic OR gene that has lost zone specificity in the olfactory epithelium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Negative Feedback Regulation Ensures the One Receptor-One Olfactory Neuron Rule in Mouse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

The Dlx5 homeodomain gene is essential for olfactory development and connectivity in the mouse.

1 reference

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5 July 2018

Identification of a testicular odorant receptor mediating human sperm chemotaxis

1 reference

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5 July 2018

Initial sequencing and comparative analysis of the mouse genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

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The Bioperl toolkit: Perl modules for the life sciences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Cloning of a novel Olf-1/EBF-like gene, O/E-4, by degenerate oligo-based direct selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Genomic analysis of orthologous mouse and human olfactory receptor loci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

The complete human olfactory subgenome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

The genomic structure of human olfactory receptor genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

The olfactory receptor gene superfamily: data mining, classification, and nomenclature

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Sequence, structure, and evolution of a complete human olfactory receptor gene cluster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Olfactory neurons expressing closely linked and homologous odorant receptor genes tend to project their axons to neighboring glomeruli on the olfactory bulb

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

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Small subfamily of olfactory receptor genes: structural features, expression pattern and genomic organization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

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Conservation of sequence and structure flanking the mouse and human beta-globin loci: the beta-globin genes are embedded within an array of odorant receptor genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

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Combinatorial receptor codes for odors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Cloning and functional characterization of Roaz, a zinc finger protein that interacts with O/E-1 to regulate gene expression: implications for olfactory neuronal development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

The characterization of the Olf-1/EBF-like HLH transcription factor family: implications in olfactory gene regulation and neuronal development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

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Spatial segregation of odorant receptor expression in the mammalian olfactory epithelium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Molecular cloning of the olfactory neuronal transcription factor Olf-1 by genetic selection in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Allelic inactivation regulates olfactory receptor gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

A zonal organization of odorant receptor gene expression in the olfactory epithelium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Failure of B-cell differentiation in mice lacking the transcription factor EBF.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

A novel multigene family may encode odorant receptors: a molecular basis for odor recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

5 July 2018

Different evolutionary processes shaped the mouse and human olfactory receptor gene families

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-561

21 January 2018

Minigenes impart odorant receptor-specific axon guidance in the olfactory bulb

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-561

21 January 2018

Evolution of the "OR37" subfamily of olfactory receptors: a cross-species comparison

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-561

21 January 2018

Promotor elements governing the clustered expression pattern of odorant receptor genes

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-561

21 January 2018

Genetic disruptions of O/E2 and O/E3 genes reveal involvement in olfactory receptor neuron projection

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-561

21 January 2018

Differential impact of Lhx2 deficiency on expression of class I and class II odorant receptor genes in mouse.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-561

21 January 2018

Odorant receptor gene choice is reset by nuclear transfer from mouse olfactory sensory neurons

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-561

21 January 2018

A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-561

21 January 2018

Odorant and vomeronasal receptor genes in two mouse genome assemblies.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-561

21 January 2018

Comparative assessment of methods for aligning multiple genome sequences

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-561

21 January 2018

Olfactory receptors in the mouse septal organ

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-561

21 January 2018

The olfactory receptor gene superfamily of the mouse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247239

28 October 2018

Local and cis effects of the H element on expression of odorant receptor genes in mouse

1 reference

https://pubmed.ncbi.nlm.nih.gov/22085861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutually exclusive expression of odorant receptor transgenes

1 reference

https://pubmed.ncbi.nlm.nih.gov/22085861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Promoter motifs of olfactory receptor genes expressed in distinct topographic patterns

1 reference

https://pubmed.ncbi.nlm.nih.gov/22085861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-12-561

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

ResearchGate publication ID

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