(Q41011138)

25 September 2017

Weeder Web: discovery of transcription factor binding sites in a set of sequences from co-regulated genes (English)

1 reference

25 September 2017

4

1 reference

25 September 2017

Giancarlo Mauri

3

0 references

author name string

Giulio Pavesi

series ordinal

1

1 reference

25 September 2017

Paolo Mereghetti

series ordinal

2

1 reference

25 September 2017

language of work or name

1 reference

1 July 2004

1 reference

25 September 2017

Nucleic Acids Research

1 reference

25 September 2017

32

1 reference

25 September 2017

Web Server issue

1 reference

25 September 2017

W199-203

1 reference

Background rareness-based iterative multiple sequence alignment algorithm for regulatory element detection

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

Transcription regulation and animal diversity

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

Gibbs Recursive Sampler: finding transcription factor binding sites

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

Discovery of novel transcription factor binding sites by statistical overrepresentation

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

DNA binding sites: representation and discovery

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

Identifying DNA and protein patterns with statistically significant alignments of multiple sequences

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

Selection of DNA binding sites by regulatory proteins

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

Software for the analysis of DNA sequence elements of transcription.

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

GeneSyn: a tool for detecting conserved gene order across genomes.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

Algorithms for extracting structured motifs using a suffix tree with an application to promoter and regulatory site consensus identification.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

SCPD: a promoter database of the yeast Saccharomyces cerevisiae.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441603

An algorithm for finding signals of unknown length in DNA sequences

19 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15215380

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Finding protein-binding sites in DNA sequences: the next generation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15215380

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKH465

1 reference

25 September 2017

journals/nar/PavesiMMP04

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

25 September 2017

PubMed publication ID

15215380

1 reference