(Q34089339)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

title

Genome-wide identification and functional prediction of novel and drought-responsive lincRNAs in Populus trichocarpa (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

1 reference

Populus trichocarpa

1 reference

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

0 references

Peng Shuai

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Dan Liang

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Sha Tang

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Zhoujia Zhang

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Chu-Yu Ye

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Yanyan Su

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Weilun Yin

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

publication date

19 June 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

Journal of Experimental Botany

20 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

volume

65

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

issue

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

page(s)

4975-4983

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

Populus euphratica: the transcriptomic response to drought stress

20 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Pervasive transcription of the human genome produces thousands of previously unidentified long intergenic noncoding RNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Gene regulation by the act of long non-coding RNA transcription

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

GmNFYA3, a target gene of miR169, is a positive regulator of plant tolerance to drought stress

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Natural RNA circles function as efficient microRNA sponges

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Potential roles of microRNAs in regulating long intergenic noncoding RNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Human disease-associated genetic variation impacts large intergenic non-coding RNA expression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Classification and comparison of small RNAs from plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Genome-wide analysis uncovers regulation of long intergenic noncoding RNAs in Arabidopsis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Computational identification and functional predictions of long noncoding RNA in Zea mays

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Target mimics: an embedded layer of microRNA-involved gene regulatory networks in plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Identification and properties of 1,119 candidate lincRNA loci in the Drosophila melanogaster genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

A novel hypoxic stress-responsive long non-coding RNA transcribed by RNA polymerase III in Arabidopsis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Long noncoding RNA: unveiling hidden layer of gene regulatory networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

lincRNAs act in the circuitry controlling pluripotency and differentiation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

psRNATarget: a plant small RNA target analysis server

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Genome-wide characterization of new and drought stress responsive microRNAs in Populus euphratica

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

No-nonsense functions for long noncoding RNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Identification and characterization of wheat long non-protein coding RNAs responsive to powdery mildew infection and heat stress by using microarray analysis and SBS sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

miRBase: integrating microRNA annotation and deep-sequencing data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

A collection of target mimics for comprehensive analysis of microRNA function in Arabidopsis thaliana

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Genome-wide computational identification and manual annotation of human long noncoding RNA genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Decoding the function of nuclear long non-coding RNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Toggle involving cis-interfering noncoding RNAs controls variegated gene expression in yeast

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

SOAP2: an improved ultrafast tool for short read alignment

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

RepPop: a database for repetitive elements in Populus trichocarpa

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Target mimicry provides a new mechanism for regulation of microRNA activity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

OrfPredictor: predicting protein-coding regions in EST-derived sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

Codon usage tabulated from international DNA sequence databases: status for the year 2000

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

The significance of digital gene expression profiles

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144774

A global overview of drought and heat-induced tree mortality reveals emerging climate change risks for forests

5 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU256

Identification of long non-protein coding RNAs in chicken skeletal muscle using next generation sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU256

Stress-responsive microRNAs in Populus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU256

POWER_SAGE: comparing statistical tests for SAGE experiments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU256

Widespread long noncoding RNAs as endogenous target mimics for microRNAs in plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU256

Effective small RNA destruction by the expression of a short tandem target mimic in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU256

Global identification of miRNAs and targets in Populus euphratica under salt stress

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24948679

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

LincRNAs join the pluripotency alliance

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24948679

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/JXB/ERU256

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

PubMed publication ID

24948679

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24948679%20AND%20SRC:MED&resulttype=core&format=json