(Q34089360)

English

Experimental and bioinformatic characterization of a recombinant polygalacturonase-inhibitor protein from pearl millet and its interaction with fungal polygalacturonases

scientific article

In more languages

default for all languages

No label defined

No description defined

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Experimental and bioinformatic characterization of a recombinant polygalacturonase-inhibitor protein from pearl millet and its interaction with fungal polygalacturonases (English)

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

1 reference

based on heuristic

inferred from title

Ramachandra K Kini

object named as

Ramachandra K Kini

7

0 references

author name string

S Ashok Prabhu

1

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Ratna Singh

2

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Stephan Kolkenbrock

3

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Neerakkal Sujeeth

4

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Nour Eddine El Gueddari

5

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Bruno M Moerschbacher

6

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Martin Wagenknecht

8

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

publication date

30 June 2014

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Journal of Experimental Botany

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

65

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

17

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

5033-5047

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Leucine-Rich Repeat (LRR) Domains Containing Intervening Motifs in Plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

KoBaMIN: a knowledge-based minimization web server for protein structure refinement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Integration of gene-based markers in a pearl millet genetic map for identification of candidate genes underlying drought tolerance quantitative trait loci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

SignalP 4.0: discriminating signal peptides from transmembrane regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Fungal enzyme sets for plant polysaccharide degradation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Web servers and services for electrostatics calculations with APBS and PDB2PQR

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

CDD: a Conserved Domain Database for the functional annotation of proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Comparative study of protein-protein interaction observed in PolyGalacturonase-Inhibiting Proteins from Phaseolus vulgaris and Glycine max and PolyGalacturonase from Fusarium moniliforme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Integration of evolutionary and desolvation energy analysis identifies functional sites in a plant immunity protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Mapping glycans onto specific N-linked glycosylation sites of Pyrus communis PGIP redefines the interface for EPG-PGIP interactions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Enzyme-inhibitor interactions at the plant-pathogen interface.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Pectin structure and biosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

The RosettaDock server for local protein-protein docking

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Crystal structure of the endopolygalacturonase from the phytopathogenic fungus Colletotrichum lupini and its interaction with polygalacturonase-inhibiting proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

PIC: Protein Interactions Calculator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

TreeDyn: towards dynamic graphics and annotations for analyses of trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Characterization of expressed Pgip genes in rice and wheat reveals similar extent of sequence variation to dicot PGIPs and identifies an active PGIP lacking an entire LRR repeat

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

GRAMM-X public web server for protein-protein docking

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Protein production by auto-induction in high density shaking cultures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Role of extracytoplasmic leucine rich repeat proteins in plant defence mechanisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Polygalacturonase-inhibiting proteins can function as activators of polygalacturonase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

UCSF Chimera--a visualization system for exploratory research and analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Protein structure prediction and analysis using the Robetta server.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

The role of plant cell wall polysaccharide composition in disease resistance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

The OsFOR1 gene encodes a polygalacturonase-inhibiting protein (PGIP) that regulates floral organ number in rice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Isolation of a Polygalacturonase-Inhibiting Protein (PGIP) from Wheat

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

The crystal structure of polygalacturonase-inhibiting protein (PGIP), a leucine-rich repeat protein involved in plant defense

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Use of amide exchange mass spectrometry to study conformational changes within the endopolygalacturonase II-homogalacturonan-polygalacturonase inhibiting protein system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Phytochrome signalling modulates the SA-perceptive pathway in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

The role of polygalacturonase-inhibiting proteins (PGIPs) in defense against pathogenic fungi.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Structural requirements of endopolygalacturonase for the interaction with PGIP (polygalacturonase-inhibiting protein)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Secondary structure and post-translational modifications of the leucine-rich repeat protein PGIP (polygalacturonase-inhibiting protein) from Phaseolus vulgaris.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Are diverse signalling pathways integrated in the regulation of arabidopsis antioxidant defence gene expression in response to excess excitation energy?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

T-Coffee: A novel method for fast and accurate multiple sequence alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

The specificity of polygalacturonase-inhibiting protein (PGIP): a single amino acid substitution in the solvent-exposed beta-strand/beta-turn region of the leucine-rich repeats (LRRs) confers a new recognition capability.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Crystal structure of polygalacturonase from Erwinia carotovora ssp. carotovora

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

VERIFY3D: assessment of protein models with three-dimensional profiles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

The leucine-rich repeat: a versatile binding motif

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Molecular light switches for plant genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

5 July 2018

Determination of reducing sugars with 3-methyl-2-benzothiazolinonehydrazone

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Structural resolution of the complex between a fungal polygalacturonase and a plant polygalacturonase-inhibiting protein by small-angle X-ray scattering

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Isolation and characterization of two genes encoding polygalacturonase-inhibiting protein from Populus deltoides

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Characterization of the complex locus of bean encoding polygalacturonase-inhibiting proteins reveals subfunctionalization for defense against fungi and insects

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

The characterization of the soybean polygalacturonase-inhibiting proteins (Pgip) gene family reveals that a single member is responsible for the activity detected in soybean tissues

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

A fast SEQUEST cross correlation algorithm

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Comparative protein structure modeling using Modeller

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

The bean polygalacturonase-inhibiting protein 2 (PvPGIP2) is highly conserved in common bean (Phaseolus vulgaris L.) germplasm and related species.

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Tandemly duplicated Arabidopsis genes that encode polygalacturonase-inhibiting proteins are regulated coordinately by different signal transduction pathways in response to fungal infection

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Brassica napus possesses an expanded set of polygalacturonase inhibitor protein genes that are differentially regulated in response to Sclerotinia sclerotiorum infection, wounding and defense hormone treatment.

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Inhibition of polygalacturonase from Verticillium dahliae by a polygalacturonase inhibiting protein from cotton

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Functional characterisation of wheat Pgip genes reveals their involvement in the local response to wounding

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Expression profile analysis of the polygalacturonase-inhibiting protein genes in rice and their responses to phytohormones and fungal infection

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

A single amino acid substitution in highly similar endo-PGs from Fusarium verticillioides and related Fusarium species affects PGIP inhibition

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

An endo-polygalacturonase (PG) of Fusarium moniliforme escaping inhibition by plant polygalacturonase-inhibiting proteins (PGIPs) provides new insights into the PG-PGIP interaction

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Three aspartic acid residues of polygalacturonase-inhibiting protein (PGIP) from Phaseolus vulgaris are critical for inhibition of Fusarium phyllophilum PG.

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Timing of plant immune responses by a central circadian regulator.

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

GROMACS 3.0: a package for molecular simulation and trajectory analysis

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Identification of target amino acids that affect interactions of fungal polygalacturonases and their plant inhibitors

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Polygalacturonase inhibitor protein from fruits of anthracnose resistant and susceptible varieties of Chilli (Capsicum annuum L).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4144779

28 October 2018

The polygalacturonase-inhibiting protein PGIP2 of Phaseolus vulgaris has evolved a mixed mode of inhibition of endopolygalacturonase PG1 of Botrytis cinerea

1 reference

https://api.crossref.org/works/10.1093%2FJXB%2FERU266

21 January 2018

Rapid Regulation of Light Harvesting and Plant Fitness in the Field

1 reference

https://pubmed.ncbi.nlm.nih.gov/24980909

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Endo- and exopolygalacturonases of Ralstonia solanacearum are inhibited by polygalacturonase-inhibiting protein (PGIP) activity in tomato stem extracts

1 reference

https://pubmed.ncbi.nlm.nih.gov/24980909

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Copy number determination, expression analysis of genes potentially involved in replication, and stability assays of pAL1--the linear megaplasmid of Arthrobacter nitroguajacolicus Rü61a

1 reference

https://pubmed.ncbi.nlm.nih.gov/24980909

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystallization and preliminary X-ray diffraction study of the endo-polygalacturonase from Fusarium moniliforme

1 reference

https://pubmed.ncbi.nlm.nih.gov/24980909

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/JXB/ERU266

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

release_mojo27kgibbp3hzdikg3wjjzme

1 reference

https://api.fatcat.wiki/v0/release/mojo27kgibbp3hzdikg3wjjzme

24 November 2022

based on heuristic

mapped directly with Wikidata item

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q34089360&oldid=1839361325"