(Q34097643)

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Tandem mass spectrometry of heparan sulfate negative ions: sulfate loss patterns and chemical modification methods for improvement of product ion profiles

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scholarly article

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8 February 2020

Tandem mass spectrometry of heparan sulfate negative ions: sulfate loss patterns and chemical modification methods for improvement of product ion profiles (English)

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8 February 2020

3

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8 February 2020

5

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8 February 2020

author name string

Xiaofeng Shi

1

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8 February 2020

Yu Huang

2

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8 February 2020

Hicham Naimy

4

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8 February 2020

publication date

24 July 2012

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8 February 2020

Journal of the American Society for Mass Spectrometry

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8 February 2020

23

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8 February 2020

9

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8 February 2020

1498-1511

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8 February 2020

https://scigraph.springernature.com/pub.10.1007/s13361-012-0429-4

0 references

LC-MS(n) analysis of isomeric chondroitin sulfate oligosaccharides using a chemical derivatization strategy

1 reference

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5 July 2018

Improved liquid chromatography-MS/MS of heparan sulfate oligosaccharides via chip-based pulsed makeup flow

1 reference

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5 July 2018

Highly sulfated nonreducing end-derived heparan sulfate domains bind fibroblast growth factor-2 with high affinity and are enriched in biologically active fractions

1 reference

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5 July 2018

Sodium hydroxide permethylation of heparin disaccharides

1 reference

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5 July 2018

Mass spectrometry and glycomics

1 reference

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5 July 2018

Negative electron transfer dissociation of glycosaminoglycans.

1 reference

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5 July 2018

Extended N-sulfated domains reside at the nonreducing end of heparan sulfate chains.

1 reference

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5 July 2018

Screening for anticoagulant heparan sulfate octasaccharides and fine structure characterization using tandem mass spectrometry

1 reference

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5 July 2018

Phosphoproteomics for the masses

1 reference

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5 July 2018

Glycoproteomics: past, present and future

1 reference

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5 July 2018

Electron-induced dissociation of glycosaminoglycan tetrasaccharides

1 reference

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5 July 2018

Influence of charge state and sodium cationization on the electron detachment dissociation and infrared multiphoton dissociation of glycosaminoglycan oligosaccharides

1 reference

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5 July 2018

Mining the plasma proteome for cancer biomarkers

1 reference

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5 July 2018

Heparin, heparan sulfate and heparanase in cancer: remedy for metastasis?

1 reference

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5 July 2018

The biological impact of mass-spectrometry-based proteomics

1 reference

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5 July 2018

Glypican-1 modulates the angiogenic and metastatic potential of human and mouse cancer cells

1 reference

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5 July 2018

Probing the dynamics of O-GlcNAc glycosylation in the brain using quantitative proteomics

1 reference

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5 July 2018

Heparan sulphate proteoglycans fine-tune mammalian physiology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146577

5 July 2018

Complex N-glycan number and degree of branching cooperate to regulate cell proliferation and differentiation.

1 reference

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5 July 2018

Carbohydrate structural isomers analyzed by sequential mass spectrometry

1 reference

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5 July 2018

In vivo and in vitro degradation of heparan sulfate (HS) proteoglycans by HPR1 in pancreatic adenocarcinomas. Loss of cell surface HS suppresses fibroblast growth factor 2-mediated cell signaling and proliferation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146577

5 July 2018

Interactions between heparan sulfate and proteins: the concept of specificity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146577

5 July 2018

Heparan sulfate-related oligosaccharides in ternary complex formation with fibroblast growth factors 1 and 2 and their receptors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146577

5 July 2018

The molecular diversity of glycosaminoglycans shapes animal development.

1 reference

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5 July 2018

The effective temperature of Peptide ions dissociated by sustained off-resonance irradiation collisional activation in fourier transform mass spectrometry

1 reference

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5 July 2018

The sweet and sour of cancer: glycans as novel therapeutic targets

1 reference

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5 July 2018

Domain-specific modification of heparan sulfate by Qsulf1 modulates the binding of the bone morphogenetic protein antagonist Noggin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146577

5 July 2018

Tandem mass spectrometry of sulfated heparin-like glycosaminoglycan oligosaccharides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146577

5 July 2018

Heparin-protein interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146577

5 July 2018

Molecular diversity of heparan sulfate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146577

5 July 2018

Structural diversity of N-sulfated heparan sulfate domains: distinct modes of glucuronyl C5 epimerization, iduronic acid 2-O-sulfation, and glucosamine 6-O-sulfation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146577

5 July 2018

The conformational activation of antithrombin. A 2.85-A structure of a fluorescein derivative reveals an electrostatic link between the hinge and heparin binding regions

1 reference

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5 July 2018

Defining the interleukin-8-binding domain of heparan sulfate

1 reference

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5 July 2018

Characterization of heparin and heparan sulfate domains binding to the long splice variant of platelet-derived growth factor A chain

1 reference

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5 July 2018

Structural domains of heparan sulphate for specific recognition of the C-terminal heparin-binding domain of human plasma fibronectin (HEPII).

1 reference

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5 July 2018

Cartilage proteoglycans: structure and potential functions

1 reference

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5 July 2018

Utility of non-covalent complexes in the matrix-assisted laser desorption ionization mass spectrometry of heparin-derived oligosaccharides

1 reference

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5 July 2018

Electron detachment dissociation of neutral and sialylated oligosaccharides.

1 reference

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21 January 2018

Delineating mechanisms of dissociation for isomeric heparin disaccharides using isotope labeling and ion trap tandem mass spectrometry.

1 reference

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21 January 2018

Compositional analysis and quantification of heparin and heparan sulfate by electrospray ionization ion trap mass spectrometry

1 reference

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21 January 2018

Disaccharide structure code for the easy representation of constituent oligosaccharides from glycosaminoglycans

1 reference

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21 January 2018

Competing fragmentation processes in tandem mass spectra of heparin-like glycosaminoglycans

1 reference

https://api.crossref.org/works/10.1007%2FS13361-012-0429-4

21 January 2018

Identification of O-GlcNAc sites on proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/22825743

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transgenic or tumor-induced expression of heparanase upregulates sulfation of heparan sulfate

1 reference

https://pubmed.ncbi.nlm.nih.gov/22825743

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of vascular endothelial growth factor binding and activity by extracellular pH

1 reference

https://pubmed.ncbi.nlm.nih.gov/22825743

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel regio- and stereoselective O-6-desulfation of the glucosamine moiety of heparin with N-methylpyrrolidinone-water or N,N-dimethylformamide-water mixtures

1 reference

https://pubmed.ncbi.nlm.nih.gov/22825743

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1H and 13C NMR spectral assignments of the major sequences of twelve systematically modified heparin derivatives

1 reference

https://pubmed.ncbi.nlm.nih.gov/22825743

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effective Temperature of Ions in Traveling Wave Ion Mobility Spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/22825743

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence analysis of highly sulfated, heparin-derived oligosaccharides using fast atom bombardment mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/22825743

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S13361-012-0429-4

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8 February 2020

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8 February 2020

1 reference

Europe PubMed Central

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8 February 2020

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