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English
2011 German Escherichia coli O104:H4 outbreak: whole-genome phylogeny without alignment.
scientific article
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
title
2011 German Escherichia coli O104:H4 outbreak: whole-genome phylogeny without alignment
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
main subject
Escherichia coli
1 reference
based on heuristic
inferred from title
phylogenetics
1 reference
based on heuristic
inferred from title
whole genome sequencing
1 reference
based on heuristic
inferred from title
author
Hoi Shan Kwan
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
Man Kit Cheung
object named as
Man Kit Cheung
series ordinal
1
0 references
author name string
Lei Li
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
Wenyan Nong
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
publication date
13 December 2011
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
published in
BMC Research Notes
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
volume
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
page(s)
533
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
cites work
Next generation sequencing has lower sequence coverage and poorer SNP-detection capability in the regulatory regions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280199
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5 July 2018
Presence of enterohemorrhagic Escherichia coli ST678/O104:H4 in France prior to 2011
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280199
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5 July 2018
Similarity of Shiga toxin-producing Escherichia coli O104:H4 strains from Italy and Germany
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280199
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5 July 2018
Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology
1 reference
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PubMed Central
reference URL
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5 July 2018
Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany
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PubMed Central
reference URL
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5 July 2018
Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4
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PubMed Central
reference URL
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5 July 2018
Genome sequence analyses of two isolates from the recent Escherichia coli outbreak in Germany reveal the emergence of a new pathotype: Entero-Aggregative-Haemorrhagic Escherichia coli (EAHEC)
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PubMed Central
reference URL
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5 July 2018
Characterisation of the Escherichia coli strain associated with an outbreak of haemolytic uraemic syndrome in Germany, 2011: a microbiological study
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280199
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5 July 2018
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
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5 July 2018
Whole-genome phylogeny of Escherichia coli/Shigella group by feature frequency profiles (FFPs)
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280199
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5 July 2018
Whole-genome phylogeny of mammals: evolutionary information in genic and nongenic regions
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5 July 2018
Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions
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reference URL
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5 July 2018
Analysis of collection of hemolytic uremic syndrome-associated enterohemorrhagic Escherichia coli
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5 July 2018
Confirming the phylogeny of mammals by use of large comparative sequence data sets
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5 July 2018
VFDB 2008 release: an enhanced web-based resource for comparative pathogenomics
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280199
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5 July 2018
A case of hemolytic uremic syndrome caused by Escherichia coli O104:H4
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280199
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5 July 2018
Pathogenic Escherichia coli
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280199
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5 July 2018
Chronic diarrhea, hemorrhagic colitis, and hemolytic-uremic syndrome associated with HEp-2 adherent Escherichia coli in adults infected with human immunodeficiency virus in Bangui, Central African Republic
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PubMed Central
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5 July 2018
Molecular archaeology of the Escherichia coli genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280199
retrieved
5 July 2018
Escherichia coli O104:H4 from 2011 European outbreak and strain from South Korea
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280199
retrieved
28 October 2018
Identifiers
DOI
10.1186/1756-0500-4-533
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
Dimensions Publication ID
1053494719
0 references
PMC publication ID
3280199
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
PubMed publication ID
22166159
1 reference
stated in
Europe PubMed Central
PMC publication ID
3280199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22166159%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 January 2020
ResearchGate publication ID
51875415
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