(Q34105295)

English

Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and

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scholarly article

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Europe PubMed Central

PubMed publication ID

31 July 2017

Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and (English)

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31 July 2017

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Bacillus tusciae

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Bacillus tusciae

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based on heuristic

inferred from title

Alicyclobacillaceae

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Alicyclobacillaceae

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based on heuristic

inferred from title

whole genome sequencing

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based on heuristic

inferred from title

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based on heuristic

inferred from title

Natalia N. Ivanova

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31 July 2017

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Jonathan A. Eisen

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31 July 2017

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Alla Lapidus

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Hans-Peter Klenk

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Hans-Peter Klenk

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Tijana Glavina Del Rio

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Tijana Glavina Del Rio

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Philip Hugenholtz

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Philip Hugenholtz

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Sam Pitluck

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Victor Markowitz

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Victor Markowitz

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Amrita Pati

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Jan-Fang Cheng

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David Bruce

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Cliff Han

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Konstantinos Mavromatis

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Konstantinos Mavromatis

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Lynne A. Goodwin

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Lynne Goodwin

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Rüdiger Pukall

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Rüdiger Pukall

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Loren Hauser

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Krishna Palaniappan

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Krishna Palaniappan

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Matt Nolan

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Amy Chen

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Susan Lucas

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Cynthia D Jeffries

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Cynthia D Jeffries

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Hope Tice

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John C Detter

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Alex Copeland

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Manfred Rohde

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Olga Chertkov

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Chris Daum

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Yun-Juan Chang

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Birte Abt

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James Bristow

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author name string

Feng Chen

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31 July 2017

publication date

23 September 2011

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31 July 2017

Standards in genomic sciences

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5

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1

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121-134

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31 July 2017

https://scigraph.springernature.com/pub.10.4056/sigs.2144922

0 references

The DNA bank network: the start from a german initiative

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Release LTPs104 of the All-Species Living Tree

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Extremely variable conservation of γ-type small, acid-soluble proteins from spores of some species in the bacterial order Bacillales

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Complete genome sequence of Kytococcus sedentarius type strain (541).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

En route to a genome-based classification of Archaea and Bacteria?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Prodigal: prokaryotic gene recognition and translation initiation site identification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

IMG ER: a system for microbial genome annotation expert review and curation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

A rapid bootstrap algorithm for the RAxML Web servers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

The minimum information about a genome sequence (MIGS) specification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Application of phylogenetic networks in evolutionary studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Multiple sequence alignment using partial order graphs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Gene ontology: tool for the unification of biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

The complete genome sequence of the gram-positive bacterium Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

The phylogenetic diversity of thermophilic members of the genus Bacillus as revealed by 16S rDNA analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Basic local alignment search tool

1 reference

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5 July 2018

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

1 reference

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5 July 2018

Comparative sequence analyses on the 16S rRNA (rDNA) of Bacillus acidocaldarius, Bacillus acidoterrestris, and Bacillus cycloheptanicus and proposal for creation of a new genus, Alicyclobacillus gen. nov.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

5 July 2018

Proposals Concerning the Higher Taxa of Bacteria

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2144922

21 January 2018

List of new names and new combinations previously effectively, but not validly, published

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2144922

21 January 2018

Approved Lists of Bacterial Names

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2144922

21 January 2018

Validation of the Publication of New Names and New Combinations Previously Effectively Published Outside the IJSB: List No. 17

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2144922

21 January 2018

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2144922

21 January 2018

Bacillus acidocaldarius sp.nov., an Acidophilic Thermophilic Spore-forming Bacterium

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2144922

21 January 2018

List of new names and new combinations previously effectively, but not validly, published

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

28 October 2018

Validation of publication of new names and new combinations previously effectively published outside the IJSB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236038

28 October 2018

The phylogenetic diversity of thermophilic members of the genusBacillusas revealed by 16S rDNA analysis

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2144922

21 January 2018

Identifiers

10.4056/SIGS.2144922

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Dimensions Publication ID

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PMC publication ID

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Europe PubMed Central

PubMed publication ID

31 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

ResearchGate publication ID

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