(Q34115546)

31 July 2017

title

Conserved RNaseII domain protein functions in cytoplasmic mRNA decay and suppresses Arabidopsis decapping mutant phenotypes (English)

1 reference

31 July 2017

3

Leslie E Sieburth

0 references

author name string

Weiping Zhang

series ordinal

1

1 reference

31 July 2017

Caroline Murphy

series ordinal

2

1 reference

31 July 2017

Leslie E. Sieburth

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20798041

2 July 2024

language of work or name

English

0 references

publication date

23 August 2010

1 reference

full work available at URL

31 July 2017

number of pages

5

1 reference

based on heuristic

inferred from page(s)

http://www.pnas.org/content/107/36/15981.full.pdf

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20798041

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20798041/?tool=EBI

2 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20798041

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20798041/pdf/?tool=EBI

2 July 2024

file format

Portable Document Format

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20798041

https://europepmc.org/articles/PMC2936607

2 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20798041

https://europepmc.org/articles/PMC2936607?pdf=render

2 July 2024

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20798041

https://doi.org/10.1073/pnas.1007060107

2 July 2024

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20798041

https://pnas.org/doi/pdf/10.1073/pnas.1007060107

2 July 2024

1 reference

DOI

10.1073/PNAS.1007060107

https://api.crossref.org/works/10.1073/PNAS.1007060107

Proceedings of the National Academy of Sciences of the United States of America

2 July 2024

published in

1 reference

31 July 2017

volume

107

1 reference

31 July 2017

issue

36

1 reference

31 July 2017

page(s)

15981-15985

1 reference

Nonsense-mediated mRNA decapping occurs on polyribosomes in Saccharomyces cerevisiae

31 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

CUCU modification of mRNA promotes decapping and transcript degradation in Aspergillus nidulans.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Co-translational mRNA decay in Saccharomyces cerevisiae

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Decapping is preceded by 3' uridylation in a novel pathway of bulk mRNA turnover

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

The N-terminal PIN domain of the exosome subunit Rrp44 harbors endonuclease activity and tethers Rrp44 to the yeast core exosome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Kill the messenger: mRNA decay and plant development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Widespread translational inhibition by plant miRNAs and siRNAs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Structure of the active subunit of the yeast exosome core, Rrp44: diverse modes of substrate recruitment in the RNase II nuclease family

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Detecting polymorphic regions in Arabidopsis thaliana with resequencing microarrays

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Architecture of the yeast Rrp44 exosome complex suggests routes of RNA recruitment for 3' end processing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Components of the Arabidopsis mRNA decapping complex are required for early seedling development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

P-body formation is a consequence, not the cause, of RNA-mediated gene silencing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

The highways and byways of mRNA decay

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Reconstitution, activities, and structure of the eukaryotic RNA exosome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

A single subunit, Dis3, is essentially responsible for yeast exosome core activity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Arabidopsis DCP2, DCP1, and VARICOSE form a decapping complex required for postembryonic development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Gateway-compatible vectors for plant functional genomics and proteomics

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Ge-1 is a central component of the mammalian cytoplasmic mRNA processing body

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Cytoplasmic foci are sites of mRNA decay in human cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

VARICOSE, a WD-domain protein, is required for leaf blade development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Genome-wide insertional mutagenesis of Arabidopsis thaliana

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Decapping and Decay of Messenger RNA Occur in Cytoplasmic Processing Bodies

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Novel features of the XRN-family in Arabidopsis: evidence that AtXRN4, one of several orthologs of nuclear Xrn2p/Rat1p, functions in the cytoplasm

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Messenger RNA deadenylylation precedes decapping in mammalian cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Yeast cells lacking 5'-->3' exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5' cap structure

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936607

Bringing the role of mRNA decay in the control of gene expression into focus

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007060107

A turnover pathway for both stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007060107

Genome-wide analysis of mRNA decay rates and their determinants in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007060107

Precision and functional specificity in mRNA decay

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007060107

Transcriptome-wide analysis of uncapped mRNAs in Arabidopsis reveals regulation of mRNA degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007060107

A link between mRNA turnover and RNA interference in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007060107

Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007060107

Unravelling the dynamics of RNA degradation by ribonuclease II and its RNA-bound complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007060107

Identification of genes expressed in the Arabidopsis female gametophyte.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007060107

Genome-wide high-resolution mapping of exosome substrates reveals hidden features in the Arabidopsis transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007060107

Identification of unstable transcripts in Arabidopsis by cDNA microarray analysis: rapid decay is associated with a group of touch- and specific clock-controlled genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007060107

21 January 2018

Identifiers

DOI

10.1073/PNAS.1007060107

1 reference

31 July 2017

0 references

1 reference

31 July 2017

1 reference