(Q34139425)

31 July 2017

Comparative analysis of the transcriptome across distant species (English)

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Roderic Guigó i Serra

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Roderic Guigó

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Cédric Howald

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Cédric Howald

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Cristina Sisu

Cristina Sisu

9

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Jiayu Wen

Jiayu Wen

84

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Anastasia A. Samsonova

Anastasia Samsonova

70

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Julien Lagarde

Julien Lagarde

50

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Joel Rozowsky

Joel Rozowsky

2

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Brenton R. Graveley

Brenton R Graveley

93

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Frank J. Slack

Frank J Slack

74

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Norbert Perrimon

Norbert Perrimon

65

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Sarah Djebali

Sarah Djebali

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Jingyi Jessica Li

Jingyi Jessica Li

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Alexandre Reymond

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Alexandre Reymond

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92

Steven E Brenner

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Adam Frankish

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Valerie Reinke

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Michael MacCoss

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Susan E Celniker

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Max E Boeck

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Dionna M Kasper

Dionna Kasper

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Kevin Y Yip

Kevin Yip

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Thomas R. Gingeras

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Thomas R Gingeras

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Jen Harrow

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Jorg Drenkow

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Alex Dobin

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Koon-Kiu Yan

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Daifeng Wang

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Carrie A Davis

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Baikang Pei

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Arif O Harmanci

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Elise A Feingold

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Peter J Good

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Sonali Jha

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Rabi Murad

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Dmitri Pervouchine

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Huaien Wang

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Chenghai Xue

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Chris Zaleski

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Robert Waterston

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LaDeana Hillier

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David M Miller

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Peter J Bickel

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Masaomi Kato

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Brent Ewing

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Chao Cheng

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James B Brown

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Michael O Duff

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Roger P Alexander

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Burak H Alver

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Raymond Auerbach

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Kimberly Bell

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Nathan P Boley

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Benjamin W Booth

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Lucy Cherbas

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Peter Cherbas

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Chao Di

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Gang Fang

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Megan Fastuca

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Guanjun Gao

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Ann Hammonds

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Roger A Hoskins

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Long Hu

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Haiyan Huang

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Chau Huynh

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Thomas C Kaufman

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Robert R Kitchen

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Erik Ladewig

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Eric Lai

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Jing Leng

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Zhi Lu

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Gemma May

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Rebecca McWhirter

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Gennifer Merrihew

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Ali Mortazavi

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Brian Oliver

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Sara Olson

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Peter J Park

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Garrett Robinson

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Felix Schlesinger

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Anurag Sethi

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William C Spencer

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Marcus H Stoiber

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Pnina Strasbourger

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Owen A Thompson

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Kenneth H Wan

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Guilin Wang

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Kathie L Watkins

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Kejia Wen

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Li Yang

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Yan Zhang

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Henry Zheng

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language of work or name

English

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publication date

1 August 2014

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512

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7515

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31 July 2017

445-448

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https://scigraph.springernature.com/pub.10.1038/nature13424

31 July 2017

0 references

cites work

Comparative analysis of regulatory information and circuits across distant species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Evolutionary dynamics of gene and isoform regulation in Mammalian tissues.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Landscape of transcription in human cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

An integrated encyclopedia of DNA elements in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

The evolution of gene expression levels in mammalian organs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

The developmental transcriptome of Drosophila melanogaster

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Identification of functional elements and regulatory circuits by Drosophila modENCODE

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Gene expression divergence recapitulates the developmental hourglass model

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Heterochronic evolution reveals modular timing changes in budding yeast transcriptomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Histone modification levels are predictive for gene expression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Optimization by Simulated Annealing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

A gene-coexpression network for global discovery of conserved genetic modules

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Intron definition in splicing of small Drosophila introns

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Developmental milestones punctuate gene expression in the Caenorhabditis embryo.

5 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13424

Detecting fuzzy community structures in complex networks with a Potts model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13424

OrthoClust: an orthology-based network framework for clustering data across multiple species

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13424

Comparison of D. melanogaster and C. elegans developmental stages, tissues, and cells by modENCODE RNA-seq data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13424

The evolutionary landscape of alternative splicing in vertebrate species

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4155737

Regulatory analysis of the C. elegans genome with spatiotemporal resolution

28 October 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13424

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NATURE13424

1 reference

31 July 2017

1 reference

31 July 2017

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