(Q34148115)

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Mathematical modeling and comparison of protein size distribution in different plant, animal, fungal and microbial species reveals a negative correlation between protein size and protein number, thus providing insight into the evolution of proteomes

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scholarly article

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Europe PubMed Central

PubMed publication ID

31 July 2017

Mathematical modeling and comparison of protein size distribution in different plant, animal, fungal and microbial species reveals a negative correlation between protein size and protein number, thus providing insight into the evolution of proteomes (English)

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

protein evolution

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species distribution model

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based on heuristic

inferred from title

Paulino Pérez-Rodríguez

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Paulino Pérez-Rodríguez

2

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author name string

Axel Tiessen

1

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Luis José Delaye-Arredondo

3

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

publication date

1 February 2012

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Europe PubMed Central

PubMed publication ID

31 July 2017

BMC Research Notes

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Europe PubMed Central

PubMed publication ID

31 July 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

85

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

copyright license

Creative Commons Attribution 2.0 Generic

1 February 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

1 reference

April 2022 Public Data File from Crossref

Missing genes in the annotation of prokaryotic genomes

1 reference

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Evolution of the Structure of Ferredoxin Based on Living Relics of Primitive Amino Acid Sequences

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The relationships between the isoelectric point and: length of proteins, taxonomy and ecology of organisms

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5 July 2018

Protein structure: evolutionary bridges to new folds.

1 reference

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5 July 2018

Comparative genomics and structural biology of the molecular innovations of eukaryotes

1 reference

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5 July 2018

Protein structure comparison: implications for the nature of 'fold space', and structure and function prediction.

1 reference

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Structural proteomics of minimal organisms: conservation of protein fold usage and evolutionary implications

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On the origin and highly likely completeness of single-domain protein structures.

1 reference

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Comparison of theoretical proteomes: identification of COGs with conserved and variable pI within the multimodal pI distribution

1 reference

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Protein length in eukaryotic and prokaryotic proteomes

1 reference

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Selective pressures on the olfactory receptor repertoire since the human-chimpanzee divergence

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Cost-minimization of amino acid usage.

1 reference

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The protein folds as platonic forms: new support for the pre-Darwinian conception of evolution by natural law.

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Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis

1 reference

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The objects of selection

1 reference

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The evolution of proteins from random amino acid sequences. I. Evidence from the lengthwise distribution of amino acids in modern protein sequences

1 reference

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Relationship between the total size of exons and introns in protein-coding genes of higher eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296660

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The size distributions of proteins, mRNA, and nuclear RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296660

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Theory for the folding and stability of globular proteins

1 reference

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Theory for protein mutability and biogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296660

5 July 2018

How big is the universe of exons?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296660

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The classification and origins of protein folding patterns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296660

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Statistical distribution of hydrophobic residues along the length of protein chains. Implications for protein folding and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296660

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Amino acid preferences of small proteins. Implications for protein stability and evolution

1 reference

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4-Oxalocrotonate tautomerase, an enzyme composed of 62 amino acid residues per monomer

1 reference

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Compositional nonrandomness: A quantitatively conserved evolutionary invariant

1 reference

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Infinite allele model with varying mutation rate

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Implications of RNA⋅RNA Splicing in Evolution of Eukaryotic Cells

1 reference

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Amino Acid Composition of Proteins: Selection Against the Genetic Code

1 reference

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A relationship between GC content and coding-sequence length.

1 reference

https://api.crossref.org/works/10.1186%2F1756-0500-5-85

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The evolution of proteins from random amino acid sequences: II. Evidence from the statistical distributions of the lengths of modern protein sequences

1 reference

https://api.crossref.org/works/10.1186%2F1756-0500-5-85

21 January 2018

Molecular phylogeny of eukaryotes

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A sequence based synteny map between soybean and Arabidopsis thaliana

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How many protein-coding genes are there in theSaccharomyces cerevisiae genome?

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Implications of thermodynamics of protein folding for evolution of primary sequences

1 reference

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Repeating sequences and gene duplication in proteins

1 reference

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based on heuristic

inferred from PubMed ID database lookup

Protein-length distributions for the three domains of life

1 reference

https://pubmed.ncbi.nlm.nih.gov/22296664

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based on heuristic

inferred from PubMed ID database lookup

Exons--present from the beginning?

1 reference

https://pubmed.ncbi.nlm.nih.gov/22296664

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based on heuristic

inferred from PubMed ID database lookup

Generation of overlapping open reading frames

1 reference

https://pubmed.ncbi.nlm.nih.gov/22296664

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Average proteins and the genetic code

1 reference

https://pubmed.ncbi.nlm.nih.gov/22296664

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inferred from PubMed ID database lookup

Identifiers

10.1186/1756-0500-5-85

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Dimensions Publication ID

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

ResearchGate publication ID

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