(Q34149970)

31 July 2017

title

Homology inference of protein-protein interactions via conserved binding sites (English)

1 reference

protein-protein interaction

31 July 2017

main subject

1 reference

4

Stephen H Bryant

1 reference

31 July 2017

6

Anna R Panchenko

1 reference

31 July 2017

Manoj Tyagi

1

1 reference

31 July 2017

Ratna R Thangudu

series ordinal

2

1 reference

31 July 2017

Dachuan Zhang

series ordinal

3

1 reference

31 July 2017

Thomas Madej

series ordinal

5

1 reference

31 July 2017

language of work or name

English

0 references

publication date

31 January 2012

1 reference

31 July 2017

1 reference

31 July 2017

volume

7

1 reference

31 July 2017

issue

1

1 reference

31 July 2017

page(s)

e28896

1 reference

Creative Commons CC0 License

31 July 2017

copyright license

start time

31 January 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

cites work

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Detailed analysis of function divergence in a large and diverse domain superfamily: toward a refined protocol of function classification

28 July 2018

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Mechanisms of protein oligomerization, the critical role of insertions and deletions in maintaining different oligomeric states

28 July 2018

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Knowledge-based annotation of small molecule binding sites in proteins

28 July 2018

1 reference

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Protein interface conservation across structure space

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3269416

Evolution of protein binding modes in homooligomers

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3269416

Inferred Biomolecular Interaction Server--a web server to analyze and predict protein interacting partners and binding sites

28 July 2018

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Estimating the size of the human interactome

28 July 2018

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PiQSi: protein quaternary structure investigation.

28 July 2018

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Inference of macromolecular assemblies from crystalline state

28 July 2018

1 reference

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Deciphering Protein–Protein Interactions. Part II. Computational Methods to Predict Protein and Domain Interaction Partners

28 July 2018

1 reference

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Protein binding site prediction using an empirical scoring function

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3269416

Protein-protein interactions more conserved within species than across species

28 July 2018

1 reference

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Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae

28 July 2018

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NOXclass: prediction of protein-protein interaction types

28 July 2018

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Finding biologically relevant protein domain interactions: conserved binding mode analysis

28 July 2018

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28 July 2018

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28 July 2018

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Generation and analysis of a protein-protein interface data set with similar chemical and spatial patterns of interactions

28 July 2018

1 reference

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Prediction of interface residues in protein-protein complexes by a consensus neural network method: test against NMR data

28 July 2018

1 reference

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Binding properties and evolution of homodimers in protein-protein interaction networks

28 July 2018

1 reference

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CDD: a Conserved Domain Database for protein classification

28 July 2018

1 reference

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CD-Search: protein domain annotations on the fly

28 July 2018

1 reference

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Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or "interologs".

28 July 2018

1 reference

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The estimation of statistical parameters for local alignment score distributions.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3269416

Protein interaction mapping in C. elegans using proteins involved in vulval development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3269416

28 July 2018

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28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3269416

Profile analysis: detection of distantly related proteins

28 July 2018

1 reference

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Amino acid substitution matrices from protein blocks

28 July 2018

1 reference

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Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs

28 July 2018

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MMDB: Entrez's 3D-structure database.

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

Information-based clustering.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

Statistical analysis of interface similarity in crystals of homologous proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

Prediction of protein--protein interaction sites in heterocomplexes with neural networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

ProMate: a structure based prediction program to identify the location of protein-protein binding sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

HomPPI: a class of sequence homology based protein-protein interface prediction methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

X-ray crystal structure of the nitrogenase molybdenum-iron protein from Clostridium pasteurianum at 3.0-A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

Thermophilic adaptation of protein complexes inferred from proteomic homology modeling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

PQS: a protein quaternary structure file server

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

The Relationship Between Sequence and Interaction Divergence in Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

Biological Units and their Effect upon the Properties and Prediction of Protein–Protein Interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

Crystallographic structure and functional implications of the nitrogenase molybdenum-iron protein from azotobacter vinelandii

21 January 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3269416

28 October 2018

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028896

10.1371/JOURNAL.PONE.0028896

21 January 2018

Identifiers

DOI

1 reference

31 July 2017

0 references

1 reference

31 July 2017

1 reference