(Q34163003)

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Protein design is NP-hard

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scholarly article

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Europe PubMed Central

31 July 2017

Protein design is NP-hard (English)

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Europe PubMed Central

31 July 2017

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Erik Winfree

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Europe PubMed Central

31 July 2017

Niles A. Pierce

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author name string

Niles A Pierce

1

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Europe PubMed Central

31 July 2017

publication date

1 October 2002

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Europe PubMed Central

31 July 2017

Protein Engineering Design and Selection

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Europe PubMed Central

31 July 2017

15

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Europe PubMed Central

31 July 2017

779-782

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Europe PubMed Central

31 July 2017

10

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Europe PubMed Central

31 July 2017

Polynomial time approximation schemes for Euclidean traveling salesman and other geometric problems

1 reference

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21 January 2018

Protein design automation

1 reference

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21 January 2018

De novo protein design: fully automated sequence selection

1 reference

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21 January 2018

Computer search algorithms in protein modification and design.

1 reference

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21 January 2018

De novo design of the hydrophobic cores of proteins

1 reference

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21 January 2018

Backbone-dependent rotamer library for proteins. Application to side-chain prediction

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.10.779

21 January 2018

Efficient rotamer elimination applied to protein side-chains and related spin glasses

1 reference

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21 January 2018

Branch-and-terminate: a combinatorial optimization algorithm for protein design

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.10.779

21 January 2018

Energy functions for protein design

1 reference

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21 January 2018

Exact rotamer optimization for protein design

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.10.779

21 January 2018

Conformation of amino acid side-chains in proteins

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.10.779

21 January 2018

De novo protein design. I. In search of stability and specificity.

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.10.779

21 January 2018

Exploring the conformational space of protein side chains using dead-end elimination and the A* algorithm

1 reference

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21 January 2018

Generalized dead-end elimination algorithms make large-scale protein side-chain structure prediction tractable: implications for protein design and structural genomics.

1 reference

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21 January 2018

Design, structure and stability of a hyperthermophilic protein variant

1 reference

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21 January 2018

Tertiary templates for proteins. Use of packing criteria in the enumeration of allowed sequences for different structural classes

1 reference

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21 January 2018

P-Complete Approximation Problems

1 reference

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21 January 2018

Computational design of an integrin I domain stabilized in the open high affinity conformation

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.10.779

21 January 2018

Trading accuracy for speed: A quantitative comparison of search algorithms in protein sequence design

1 reference

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21 January 2018

Correctness of local probability in graphical models with loops.

1 reference

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21 January 2018

Automatic protein design with all atom force-fields by exact and heuristic optimization

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.10.779

21 January 2018

Finding MAPs for belief networks is NP-hard

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.10.779

21 January 2018

The dead-end elimination theorem and its use in protein side-chain positioning

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.10.779

21 January 2018

Identifiers

10.1093/PROTEIN/15.10.779

1 reference

Europe PubMed Central

31 July 2017

1 reference

Europe PubMed Central

31 July 2017

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