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Structure and function of nucleases in DNA repair: shape, grip and blade of the DNA scissors.
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PubMed publication ID
12483517
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12483517%20AND%20SRC:MED&resulttype=core&format=json
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15 December 2019
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title
Structure and function of nucleases in DNA repair: shape, grip and blade of the DNA scissors
(English)
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Europe PubMed Central
PubMed publication ID
12483517
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15 December 2019
author
Tatsuya Nishino
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1
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12483517
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15 December 2019
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Kosuke Morikawa
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2
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12483517
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1 December 2002
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12483517
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15 December 2019
published in
Oncogene
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12483517
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15 December 2019
volume
21
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12483517
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15 December 2019
issue
58
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Europe PubMed Central
PubMed publication ID
12483517
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15 December 2019
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9022-9032
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Europe PubMed Central
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12483517
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15 December 2019
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Two divalent metal ions in the active site of a new crystal form of human apurinic/apyrimidinic endonuclease, Ape1: implications for the catalytic mechanism
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Structural basis for the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I: a two metal ion mechanism
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Defective DNA-dependent protein kinase activity is linked to V(D)J recombination and DNA repair defects associated with the murine scid mutation.
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Mus81-Eme1 are essential components of a Holliday junction resolvase
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Damage tolerance protein Mus81 associates with the FHA1 domain of checkpoint kinase Cds1
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The Mre11 complex: at the crossroads of dna repair and checkpoint signalling
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Nucleotide excision repair and human syndromes
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7 January 2021
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The evolution of alpha/beta barrel enzymes
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7 January 2021
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Mutants in the Exo I motif of Escherichia coli dnaQ: defective proofreading and inviability due to error catastrophe
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7 January 2021
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A novel endonuclease mechanism directly visualized for I-PpoI
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7 January 2021
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Co-crystal of Escherichia coli RNase HI with Mn2+ ions reveals two divalent metals bound in the active site
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Defective DNA polymerase-delta proofreading causes cancer susceptibility in mice
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X-ray structure of calcineurin inhibited by the immunophilin-immunosuppressant FKBP12-FK506 complex
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Metal ions bound at the active site of the junction-resolving enzyme T7 endonuclease I
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7 January 2021
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Structural basis for proofreading during replication of the Escherichia coli chromosome
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7 January 2021
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Structural biochemistry and interaction architecture of the DNA double-strand break repair Mre11 nuclease and Rad50-ATPase
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Structure of the DNA repair and replication endonuclease and exonuclease FEN-1: coupling DNA and PCNA binding to FEN-1 activity
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Structure of the DNA repair enzyme endonuclease IV and its DNA complex: double-nucleotide flipping at abasic sites and three-metal-ion catalysis
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The crystal structure of flap endonuclease-1 from Methanococcus jannaschii
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MUS81 encodes a novel helix-hairpin-helix protein involved in the response to UV- and methylation-induced DNA damage in Saccharomyces cerevisiae
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Functional overlap between Sgs1-Top3 and the Mms4-Mus81 endonuclease
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7 January 2021
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Crystal structure of Escherichia coli RNase HI in complex with Mg2+ at 2.8 A resolution: proof for a single Mg(2+)-binding site
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7 January 2021
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DNA-dependent kinase (p350) as a candidate gene for the murine SCID defect
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The crystal structure of DNA mismatch repair protein MutS binding to a G x T mismatch
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The FEN-1 family of structure-specific nucleases in eukaryotic DNA replication, recombination and repair
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Hairpin opening and overhang processing by an Artemis/DNA-dependent protein kinase complex in nonhomologous end joining and V(D)J recombination
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Mismatch repair in replication fidelity, genetic recombination, and cancer biology
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Abasic site recognition by two apurinic/apyrimidinic endonuclease families in DNA base excision repair: the 3' ends justify the means
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DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination [corrected]
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7 January 2021
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Structure and function of the multifunctional DNA-repair enzyme exonuclease III
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7 January 2021
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inferred from DOI database lookup
Pathway correcting DNA replication errors in Saccharomyces cerevisiae
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7 January 2021
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Artemis, a novel DNA double-strand break repair/V(D)J recombination protein, is mutated in human severe combined immune deficiency.
1 reference
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Crossref
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7 January 2021
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SCOP: a structural classification of proteins database for the investigation of sequences and structures
1 reference
stated in
Crossref
reference URL
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7 January 2021
based on heuristic
inferred from DOI database lookup
Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
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7 January 2021
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inferred from DOI database lookup
Lessons learned from structural results on uracil-DNA glycosylase
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Nucleotide excision repair: from E. coli to man.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
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inferred from DOI database lookup
Structure and function of type II restriction endonucleases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Nucleotide excision repair in yeast
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
X-ray structure of T4 endonuclease VII: a DNA junction resolvase with a novel fold and unusual domain-swapped dimer architecture
1 reference
stated in
Crossref
reference URL
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7 January 2021
based on heuristic
inferred from DOI database lookup
Cellular role of yeast Apn1 apurinic endonuclease/3'-diesterase: repair of oxidative and alkylation DNA damage and control of spontaneous mutation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
BASE FLIPPING
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Building a replisome from interacting pieces: sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
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7 January 2021
based on heuristic
inferred from DOI database lookup
The X philes: structure-specific endonucleases that resolve Holliday junctions
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The 3' 5' exonucleases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The DNA double-strand break repair gene hMRE11 is mutated in individuals with an ataxia-telangiectasia-like disorder
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Structure refined to 2Å of a nicked DNA octanucleotide complex with DNase I
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
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7 January 2021
based on heuristic
inferred from DOI database lookup
Recognition of a TG mismatch: the crystal structure of very short patch repair endonuclease in complex with a DNA duplex
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Crystallographic and functional studies of very short patch repair endonuclease
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The structural basis of damaged DNA recognition and endonucleolytic cleavage for very short patch repair endonuclease
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
DNA-repair enzymes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Life without DNA repair
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The crystal structure of exonuclease RecJ bound to Mn2+ ion suggests how its characteristic motifs are involved in exonuclease activity
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Structure and function of mismatch repair proteins
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Evidence that phenylalanine 69 in Escherichia coli RuvC resolvase forms a stacking interaction during binding and destabilization of a Holliday junction DNA substrate.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FSJ.ONC.1206135
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1038/SJ.ONC.1206135
1 reference
stated in
Europe PubMed Central
PubMed publication ID
12483517
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12483517%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 December 2019
Dimensions Publication ID
1016491572
0 references
PubMed publication ID
12483517
1 reference
stated in
Europe PubMed Central
PubMed publication ID
12483517
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12483517%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 December 2019
ResearchGate publication ID
10988813
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