(Q34170573)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

title

Ligand binding by antibody IgE Lb4: assessment of binding site preferences using microcalorimetry, docking, and free energy simulations (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

1 reference

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

Klaus R. Liedl

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

author name string

Sotriffer CA

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

Flader W

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

Rode BM

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

Linthicum DS

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

Varga JM

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

language of work or name

English

0 references

publication date

1 June 1999

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

number of pages

12

1 reference

based on heuristic

inferred from page(s)

published in

Biophysical Journal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

volume

76

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

page(s)

2966-2977

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

Structural analysis of an anti-estradiol antibody

8 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Automated docking of monosaccharide substrates and analogues and methyl alpha-acarviosinide in the glucoamylase active site

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Prediction of IgE(Lb4)-ligand complex structures by automated docking.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

X-ray crystallography of antibodies.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Molecular basis of crossreactivity and the limits of antibody-antigen complementarity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Three-dimensional structure of a heteroclitic antigen-antibody cross-reaction complex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Automated docking in crystallography: analysis of the substrates of aconitase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Anatomy of the antibody molecule

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Determination of the differential effects of hydrogen bonding and water release on the binding of FK506 to native and Tyr82-->Phe82 FKBP-12 proteins using free energy simulations.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Structure of myohemerythrin in the azidomet state at 1.7/1.3 A resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Heteroclitic antibodies: differences in fine specificities between monoclonal antibodies directed against dinitrophenyl and trinitrophenyl haptens

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Rapid measurement of binding constants and heats of binding using a new titration calorimeter

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Free energy via molecular simulation: applications to chemical and biomolecular systems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Automated docking of substrates to proteins by simulated annealing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

2.9 A resolution structure of an anti-dinitrophenyl-spin-label monoclonal antibody Fab fragment with bound hapten

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Electrostatic effects in proteins: comparison of dielectric and charge models

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Mechanism of allergic cross-reactions—I. Multispecific binding of ligands to a mouse monoclonal anti-DNP IgE antibody

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

On the interpretation of biochemical data by molecular dynamics computer simulation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Mechanism of allergic cross-reactions--III. cDNA cloning and variable-region sequence analysis of two IgE antibodies specific for trinitrophenyl

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Polyfunctional antibodies. Their biology and inheritance

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

On the Specificity of Antibodies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Association constants of monoclonal antibodies for hapten: heterogeneity of frequency distribution and possible relationship with hapten molecular weight

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Predicting molecular interactions and inducible complementarity: fragment docking of Fab-peptide complexes.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300268

Molecular dynamics with coupling to an external bath

28 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Characterization of monoclonal anti-furosemide antibodies and molecular modeling studies of cross-reactive compounds

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Canonical structures for the hypervariable regions of immunoglobulins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Mechanism of allergenic cross-reactions--IV. Evidence for participation of aromatic residues in the ligand binding site of two multi-specific IgE monoclonal antibodies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Calorimetric methods for interpreting protein-ligand interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Comparison of simple potential functions for simulating liquid water

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Convergence Properties of Free Energy Calculations: .alpha.-Cyclodextrin Complexes as a Case Study

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Distributed automated docking of flexible ligands to proteins: Parallel applications of AutoDock 2.4

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Real-time biospecific interaction analysis of a natural human polyreactive monoclonal IgM antibody and its Fab and scFv fragments with several antigens

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Automated docking of ligands to antibodies: methods and applications.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Comparative docking studies on ligand binding to the multispecific antibodies IgE-La2 and IgE-Lb4

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Mechanism of allergic cross-reactions—II. Cross-stimulation, by chemically unrelated ligands, of rat basophilic leukemia cells sensitized with an anti-DNP IgE antibody

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2899%2977451-5

Isothermal titration microcalorimetry

7 January 2021

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10354424

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(99)77451-5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10354424%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

PubMed publication ID

10354424

1 reference