(Q34171913)

31 July 2017

Parallel changes in gene expression after 20,000 generations of evolution in Escherichiacoli (English)

1 reference

31 July 2017

3

1 reference

31 July 2017

Daniel E Rozen

2

0 references

Timothy F. Cooper

series ordinal

1

object named as

Tim F Cooper

1 reference

PubMed ID

12538876

31 July 2017

language of work or name

English

0 references

publication date

21 January 2003

1 reference

Proceedings of the National Academy of Sciences of the United States of America

31 July 2017

6

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

31 July 2017

100

1 reference

31 July 2017

1072-1077

1 reference

31 July 2017

3

1 reference

In vitro evolution suggests multiple origins for the hammerhead ribozyme

31 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Comparison of DeltarelA strains of Escherichia coli and Salmonella enterica serovar Typhimurium suggests a role for ppGpp in attenuation regulation of branched-chain amino acid biosynthesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Significance analysis of microarrays applied to the ionizing radiation response

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Mechanisms causing rapid and parallel losses of ribose catabolism in evolving populations of Escherichia coli B.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Improved statistical inference from DNA microarray data using analysis of variance and a Bayesian statistical framework. Analysis of global gene expression in Escherichia coli K12.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Global analysis of Escherichia coli gene expression during the acetate-induced acid tolerance response

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

The population genetics of ecological specialization in evolving Escherichia coli populations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Global gene expression profiling in Escherichia coli K12. The effects of integration host factor

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

A test of alternative models of diversification in tropical rainforests: ecological gradients vs. rainforest refugia.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Functional genomics: expression analysis of Escherichia coli growing on minimal and rich media

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Systematic changes in gene expression patterns following adaptive evolution in yeast

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

The transcriptional program of sporulation in budding yeast

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Exceptional convergent evolution in a virus.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

RegulonDB: a database on transcriptional regulation in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Exploring the metabolic and genetic control of gene expression on a genomic scale

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Evolution of high mutation rates in experimental populations of E. coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Long-term experimental evolution in Escherichia coli. IV. Targets of selection and the specificity of adaptation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Dynamics of adaptation and diversification: a 10,000-generation experiment with bacterial populations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Microbial evolution in a simple unstructured environment: genetic differentiation in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

High concentrations of ppGpp decrease the RNA chain growth rate. Implications for protein synthesis and translational fidelity during amino acid starvation in Escherichia coli.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Basal ppGpp level adjustment shown by new spoT mutants affect steady state growth rates and rrnA ribosomal promoter regulation in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Construction of an eae deletion mutant of enteropathogenic Escherichia coli by using a positive-selection suicide vector

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Convergence and divergence in the evolution of aquatic birds.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0334340100

Rainforest refugia and Australia's Wet Tropics

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0334340100

The generation of multiple co-existing mal-regulatory mutations through polygenic evolution in glucose-limited populations of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0334340100

Long-Term Experimental Evolution in Escherichia coli. I. Adaptation and Divergence During 2,000 Generations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0334340100

Long-Term Experimental Evolution in Escherichia coli. II. Changes in Life-History Traits During Adaptation to a Seasonal Environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0334340100

A simple method for genome-wide screening for advantageous insertions of mobile DNAs in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0334340100

Mutational analysis of the Escherichia coli spoT gene identifies distinct but overlapping regions involved in ppGpp synthesis and degradation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0334340100

Experimental tests of the roles of adaptation, chance, and history in evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0334340100

Host-plant adaptation drives the parallel evolution of reproductive isolation.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Adaptive mgl-regulatory mutations and genetic diversity evolving in glucose-limited Escherichia coli populations

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=298728

Nucleoid proteins stimulate stringently controlled bacterial promoters: a link between the cAMP-CRP and the (p)ppGpp regulons in Escherichia coli

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12538876

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0334340100

1 reference

release_3igzjinj5navjd5rzwos3o6xm4

31 July 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/3igzjinj5navjd5rzwos3o6xm4

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

298728

1 reference

31 July 2017

1 reference

PubMed ID

12538876