(Q34179603)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

title

Metagenomic analysis of a stable trichloroethene-degrading microbial community (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

1 reference

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

Susannah G. Tringe

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

Eoin L. Brodie

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

author name string

Vanessa L Brisson

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

Kimberlee A West

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

Lisa Alvarez-Cohen

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

publication date

1 March 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

volume

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

issue

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

page(s)

1702-1714

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

Reproducibility and quantitation of amplicon sequencing-based detection

24 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Comparative genomics of two newly isolated Dehalococcoides strains and an enrichment using a genus microarray

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Localized plasticity in the streamlined genomes of vinyl chloride respiring Dehalococcoides

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

The integrated microbial genomes system: an expanding comparative analysis resource

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Convergent evolution of metabolic roles in bacterial co-symbionts of insects

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Assembling the marine metagenome, one cell at a time

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Molecular diversity of a North Carolina wastewater treatment plant as revealed by pyrosequencing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

A bioinformatician's guide to metagenomics

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Spatial scaling of functional gene diversity across various microbial taxa.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Comparative genomics of "Dehalococcoides ethenogenes" 195 and an enrichment culture containing unsequenced "Dehalococcoides" strains

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

IMG/M: a data management and analysis system for metagenomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Use of simulated data sets to evaluate the fidelity of metagenomic processing methods

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Influence of vitamin B12 and cocultures on the growth of Dehalococcoides isolates in defined medium

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Chlorinated solvents in groundwater of the United States

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Reductive dehalogenase gene expression as a biomarker for physiological activity of Dehalococcoides spp.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Discrimination of multiple Dehalococcoides strains in a trichloroethene enrichment by quantification of their reductive dehalogenase genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Metagenomic analysis of the human distal gut microbiome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Isolation and Characterization of a Facultatively Aerobic Bacterium That Reductively Dehalogenates Tetrachloroethene to cis-1,2-Dichloroethene

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Genome sequence of the chlorinated compound–respiring bacterium Dehalococcoides species strain CBDB1

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Microbial community genomics in the ocean

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Anaerobic microbial dehalogenation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Genetic identification of a putative vinyl chloride reductase in Dehalococcoides sp. strain BAV1.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Molecular identification of the catabolic vinyl chloride reductase from Dehalococcoides sp. strain VS and its environmental distribution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Direct labeling of RNA with multiple biotins allows sensitive expression profiling of acute leukemia class predictor genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Analysis and comparison of the microbial community structures of two enrichment cultures capable of reductively dechlorinating TCE and cis-DCE.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Detoxification of vinyl chloride to ethene coupled to growth of an anaerobic bacterium

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

The biosynthesis of adenosylcobalamin (vitamin B12)

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Phylogenetic characterization of microbial communities that reductively dechlorinate TCE based upon a combination of molecular techniques

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Characterization of a novel spirochete associated with the hydrothermal vent polychaete annelid, Alvinella pompejana

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Trichloroethene reductive dehalogenase from Dehalococcoides ethenogenes: sequence of tceA and substrate range characterization

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Vinyl chloride: still a cause for concern

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

KEGG: kyoto encyclopedia of genes and genomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Dehalobacter restrictus gen. nov. and sp. nov., a strictly anaerobic bacterium that reductively dechlorinates tetra- and trichloroethene in an anaerobic respiration

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Breathing with chlorinated solvents.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Identification of a chlorobenzene reductive dehalogenase in Dehalococcoides sp. strain CBDB1.

28 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Bacterial dehalorespiration with chlorinated benzenes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Quantifying microbial communities with 454 pyrosequencing: does read abundance count?

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Identification and transcriptional analysis of trans-DCE-producing reductive dehalogenases in Dehalococcoides species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Community-wide analysis of microbial genome sequence signatures

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Microbial composition of chlorinated ethene-degrading cultures dominated by Dehalococcoides

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Acetogenesis from H2 plus CO2 by spirochetes from termite guts

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Description of Sulfurospirillum halorespirans sp. nov., an anaerobic, tetrachloroethene-respiring bacterium, and transfer of Dehalospirillum multivorans to the genus Sulfurospirillum as Sulfurospirillum multivorans comb. nov.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Molecular characterization of a dechlorinating community resulting from in situ biostimulation in a trichloroethene-contaminated deep, fractured basalt aquifer and comparison to a derivative laboratory culture

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Isolation of a bacterium that reductively dechlorinates tetrachloroethene to ethene

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Sustainable syntrophic growth of Dehalococcoides ethenogenes strain 195 with Desulfovibrio vulgaris Hildenborough and Methanobacterium congolense: global transcriptomic and proteomic analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Metagenomic sequencing of an in vitro-simulated microbial community

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Genome Sequence of the PCE-Dechlorinating Bacterium Dehalococcoides ethenogenes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Community structure and metabolism through reconstruction of microbial genomes from the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

A greedy algorithm for aligning DNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.15

Reductive dechlorination of tetrachloroethene to ethene by a two-component enzyme pathway

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Microbial reductive dehalogenation

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3498913

Molecular analysis of bacterial microbiota in the gut of the termite Reticulitermes speratus (Isoptera; Rhinotermitidae)

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22378537

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2012.15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

24 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

PubMed publication ID

22378537

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22378537%20AND%20SRC:MED&resulttype=core&format=json