(Q34182182)

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Global gene expression and systems biology analysis of bovine monocyte-derived macrophages in response to in vitro challenge with Mycobacterium bovis

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scholarly article

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Europe PubMed Central

PubMed publication ID

31 July 2017

Global gene expression and systems biology analysis of bovine monocyte-derived macrophages in response to in vitro challenge with Mycobacterium bovis (English)

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Europe PubMed Central

PubMed publication ID

31 July 2017

Mycobacterium bovis

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based on heuristic

inferred from title

object named as

Karsten Hokamp

9

0 references

object named as

David J Lynn

8

0 references

object named as

Eamonn Gormley

11

0 references

David E. MacHugh

object named as

David E MacHugh

12

0 references

Stephen V. Gordon

object named as

Stephen V Gordon

10

0 references

3

object named as

Kate E Killick

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

author name string

David A Magee

1

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Maria Taraktsoglou

2

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Nicolas C Nalpas

4

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

John A Browne

5

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Stephen D E Park

6

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Kevin M Conlon

7

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

language of work or name

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publication date

22 February 2012

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Europe PubMed Central

PubMed publication ID

31 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

7

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

2

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

e32034

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

copyright license

Creative Commons Attribution 4.0 International

22 February 2012

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April 2022 Public Data File from Crossref

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describes a project that uses

1 reference

Europe PubMed Central

22 June 2022

https://europepmc.org/article/PMC/3284544

based on heuristic

inferred from PubMed Central ID database lookup

Genome-wide transcriptional profiling of peripheral blood leukocytes from cattle infected with Mycobacterium bovis reveals suppression of host immune genes

1 reference

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Human macrophages infected with a high burden of ESAT-6-expressing M. tuberculosis undergo caspase-1- and cathepsin B-independent necrosis

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Immune signaling by RIG-I-like receptors

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Tuberculosis immunity: opportunities from studies with cattle

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28 July 2018

NOD2 controls the nature of the inflammatory response and subsequent fate of Mycobacterium tuberculosis and M. bovis BCG in human macrophages

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An oligopeptide transporter of Mycobacterium tuberculosis regulates cytokine release and apoptosis of infected macrophages

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28 July 2018

FADD: a regulator of life and death

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28 July 2018

Contrasting transcriptional responses of a virulent and an attenuated strain of Mycobacterium tuberculosis infecting macrophages

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28 July 2018

A large-scale study of differential gene expression in monocyte-derived macrophages infected with several strains of Mycobacterium avium subspecies paratuberculosis.

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28 July 2018

Regulation of antigen presentation by Mycobacterium tuberculosis: a role for Toll-like receptors

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28 July 2018

Regulation of adaptive immunity by the innate immune system

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28 July 2018

Identification of host cytosolic sensors and bacterial factors regulating the type I interferon response to Legionella pneumophila

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The genome sequence of taurine cattle: a window to ruminant biology and evolution

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28 July 2018

Cell-mediated immune responses in tuberculosis

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28 July 2018

The role of cytokines in the initiation, expansion, and control of cellular immunity to tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Pleural tuberculosis in patients with early HIV infection is associated with increased TNF-alpha expression and necrosis in granulomas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Review paper: modulation of mononuclear phagocyte function by Mycobacterium avium subsp. paratuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Genetic association and expression studies indicate a role of toll-like receptor 8 in pulmonary tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

How Mycobacterium tuberculosis subverts host immune responses.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Mycobacterium tuberculosis and the macrophage: maintaining a balance.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Apoptosis: controlled demolition at the cellular level

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Signaling pathway of autophagy associated with innate immunity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Innate gene repression associated with Mycobacterium bovis infection in cattle: toward a gene signature of disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Bystander macrophage apoptosis after Mycobacterium tuberculosis H37Ra infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

I/NI-calls for the exclusion of non-informative genes: a highly effective filtering tool for microarray data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Unveiling the roles of autophagy in innate and adaptive immunity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Primer3Plus, an enhanced web interface to Primer3

1 reference

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28 July 2018

The family of five: TIR-domain-containing adaptors in Toll-like receptor signalling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Microarray validation: factors influencing correlation between oligonucleotide microarrays and real-time PCR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

TM4 microarray software suite

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Mycobacterium tuberculosis induces interleukin-32 production through a caspase- 1/IL-18/interferon-gamma-dependent mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

The Effect of "Tween 80," Bovine Albumin, Glycerol, and Glucose on the Growth of Mycobacterium tuberculosis var. hominis (H37Rv).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

A new summarization method for Affymetrix probe level data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Reliability and reproducibility issues in DNA microarray measurements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

TLR9 regulates Th1 responses and cooperates with TLR2 in mediating optimal resistance to Mycobacterium tuberculosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Directing transition from innate to acquired immunity: defining a role for IL-6.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Mycobacterial manipulation of the host cell

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Bioconductor: open software development for computational biology and bioinformatics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Mycobacterium tuberculosis inhibits macrophage responses to IFN-gamma through myeloid differentiation factor 88-dependent and -independent mechanisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Innate inhibition of adaptive immunity: Mycobacterium tuberculosis-induced IL-6 inhibits macrophage responses to IFN-gamma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

MyD88 primes macrophages for full-scale activation by interferon-gamma yet mediates few responses to Mycobacterium tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

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1 reference

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28 July 2018

Innate immunity to Mycobacterium tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Beta-chemokines are induced by Mycobacterium tuberculosis and inhibit its growth

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Lethal tuberculosis in interleukin-6-deficient mutant mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Tumor necrosis factor-alpha is required in the protective immune response against Mycobacterium tuberculosis in mice

1 reference

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28 July 2018

An essential role for interferon gamma in resistance to Mycobacterium tuberculosis infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 July 2018

Immune responses in bovine tuberculosis: towards new strategies for the diagnosis and control of disease

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

A mechanism of virulence: virulent Mycobacterium tuberculosis strain H37Rv, but not attenuated H37Ra, causes significant mitochondrial inner membrane disruption in macrophages leading to necrosis.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Early response of bovine alveolar macrophages to infection with live and heat-killed Mycobacterium bovis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Transcriptional profiling of immune genes in bovine monocyte-derived macrophages exposed to bacterial antigens.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

c-Maf-Dependent Growth of Mycobacterium tuberculosis in a CD14hi Subpopulation of Monocyte-Derived Macrophages

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Characterisation of bovine inducible nitric oxide synthase.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Effect of Tween 80 on the growth of Mycobacterium avium complex

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Human alveolar macrophage gene responses to Mycobacterium tuberculosis strains H37Ra and H37Rv

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Gene expression profiles of European wild boar naturally infected with Mycobacterium bovis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Toll-like receptor pathways in the immune responses to mycobacteria

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

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1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Induction of macrophage-derived SLPI by Mycobacterium tuberculosis depends on TLR2 but not MyD88.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Toll-like receptor 2-dependent inhibition of macrophage class II MHC expression and antigen processing by 19-kDa lipoprotein of Mycobacterium tuberculosis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Extracellular and intracellular pattern recognition receptors cooperate in the recognition of Helicobacter pylori

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Daxx: death or survival protein?

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

IAPs block apoptotic events induced by caspase-8 and cytochrome c by direct inhibition of distinct caspases

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Mycobacterium tuberculosis evades macrophage defenses by inhibiting plasma membrane repair

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Lipid mediators in innate immunity against tuberculosis: opposing roles of PGE2 and LXA4 in the induction of macrophage death

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Regulation of interferon-gamma production by IL-12 and IL-18.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

CCL20 is overexpressed in Mycobacterium tuberculosis-infected monocytes and inhibits the production of reactive oxygen species (ROS).

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

GeneCards Version 3: the human gene integrator

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

Effects of Mycobacterium bovis on monocyte-derived macrophages from bovine tuberculosis infection and healthy cattle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 October 2018

Evasion of innate immunity by Mycobacterium tuberculosis: is death an exit strategy?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3284544

28 October 2018

Cytokine expression profiles of bovine lymph nodes: effects of Mycobacterium bovis infection and bacille Calmette-Guérin vaccination

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032034

21 January 2018

IL-6 regulates neutrophil trafficking during acute inflammation via STAT3

1 reference

https://pubmed.ncbi.nlm.nih.gov/22384131

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

IL-6 produced by macrophages infected with Mycobacterium species suppresses T cell responses

1 reference

https://pubmed.ncbi.nlm.nih.gov/22384131

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bovine natural killer cells restrict the replication of Mycobacterium bovis in bovine macrophages and enhance IL-12 release by infected macrophages

1 reference

https://pubmed.ncbi.nlm.nih.gov/22384131

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cytokine patterns in tuberculous and sarcoid granulomas: correlations with histopathologic features of the granulomatous response

1 reference

https://pubmed.ncbi.nlm.nih.gov/22384131

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inhibition of IFN-gamma-induced class II transactivator expression by a 19-kDa lipoprotein from Mycobacterium tuberculosis: a potential mechanism for immune evasion

1 reference

https://pubmed.ncbi.nlm.nih.gov/22384131

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reactivities of 20 anti-human monoclonal antibodies with leucocytes from ten different animal species

1 reference

https://pubmed.ncbi.nlm.nih.gov/22384131

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Toll-like receptors as an escape mechanism from the host defense

1 reference

https://pubmed.ncbi.nlm.nih.gov/22384131

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0032034

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

2012PLoSO...732034M

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

ResearchGate publication ID

0 references

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