(Q34184032)

31 July 2017

title

Conformation of reconstituted mononucleosomes and effect of linker histone H1 binding studied by scanning force microscopy (English)

1 reference

31 July 2017

Jochen Felix Kepert

1

1 reference

31 July 2017

Katalin Fejes Tóth

2

1 reference

31 July 2017

Maïwen Caudron

3

1 reference

31 July 2017

Norbert Mücke

4

1 reference

31 July 2017

Jörg Langowski

5

1 reference

31 July 2017

Karsten Rippe

6

1 reference

31 July 2017

language of work or name

English

0 references

publication date

1 December 2003

1 reference

31 July 2017

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31 July 2017

volume

85

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31 July 2017

issue

6

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31 July 2017

page(s)

4012-4022

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Glutaraldehyde modified mica: a new surface for atomic force microscopy of chromatin

31 July 2017

cites work

1 reference

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Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution

5 July 2018

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Conformational dynamics of the chromatin fiber in solution: determinants, mechanisms, and functions

5 July 2018

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Role of DNA sequence in nucleosome stability and dynamics

5 July 2018

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DNA methylation-dependent chromatin fiber compaction in vivo and in vitro: requirement for linker histone

5 July 2018

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Asymmetries in the nucleosome core particle at 2.5 A resolution

5 July 2018

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Linker histone binding and displacement: versatile mechanism for transcriptional regulation

5 July 2018

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Analysis of chromatin by scanning force microscopy

5 July 2018

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The role of histone H1 in chromatin condensation and transcriptional repression.

5 July 2018

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A method for directly fitting the time derivative of sedimentation velocity data and an alternative algorithm for calculating sedimentation coefficient distribution functions.

5 July 2018

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Calculation of hydrodynamic properties of globular proteins from their atomic-level structure

5 July 2018

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Histone H1 is a specific repressor of core histone acetylation in chromatin.

5 July 2018

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Preparation of nucleosome core particle from recombinant histones

5 July 2018

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The location of the linker histone on the nucleosome

5 July 2018

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Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin

5 July 2018

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Position and orientation of the globular domain of linker histone H5 on the nucleosome.

5 July 2018

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Differential nucleosome positioning on Xenopus oocyte and somatic 5 S RNA genes determines both TFIIIA and H1 binding: a mechanism for selective H1 repression.

5 July 2018

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Linker histone tails and N-tails of histone H3 are redundant: scanning force microscopy studies of reconstituted fibers

5 July 2018

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Contributions of linker histones and histone H3 to chromatin structure: scanning force microscopy studies on trypsinized fibers

5 July 2018

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Chromatin fiber structure: morphology, molecular determinants, structural transitions.

5 July 2018

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Application of atomic force microscopy to visualization of DNA, chromatin, and chromosomes

5 July 2018

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Histone H1 and chromatin higher-order structure

5 July 2018

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Crystal structure of the nucleosome core particle at 2.8 A resolution

5 July 2018

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Histone structure and the organization of the nucleosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Visualization and analysis of chromatin by scanning force microscopy.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Superhelix dimensions of a 1868 base pair plasmid determined by scanning force microscopy in air and in aqueous solution.

5 July 2018

1 reference

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Nucleosome packaging and nucleosome positioning of genomic DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Scanning force microscopy of DNA deposited onto mica: equilibration versus kinetic trapping studied by statistical polymer chain analysis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Scanning force microscopy reveals ellipsoid shape of chicken erythrocyte nucleosomes

5 July 2018

1 reference

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What determines the folding of the chromatin fiber?

5 July 2018

1 reference

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The linker histones and chromatin structure: new twists

5 July 2018

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DNA binding to mica correlates with cationic radius: assay by atomic force microscopy

5 July 2018

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Linker histone-dependent DNA structure in linear mononucleosomes.

5 July 2018

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Chromatin conformation and salt-induced compaction: three-dimensional structural information from cryoelectron microscopy

5 July 2018

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Evidence of DNA bending in transcription complexes imaged by scanning force microscopy

5 July 2018

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A chromatin folding model that incorporates linker variability generates fibers resembling the native structures

5 July 2018

1 reference

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Atomic force microscope measurements of nucleosome cores assembled along defined DNA sequences

5 July 2018

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The three-dimensional architecture of chromatin in situ: electron tomography reveals fibers composed of a continuously variable zig-zag nucleosomal ribbon

5 July 2018

1 reference

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Histone H1 is located in the interior of the chromatin 30-nm filament.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Probing chromatin with the scanning force microscope

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Three-dimensional structure of extended chromatin fibers as revealed by tapping-mode scanning force microscopy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Linker histones H1 and H5 prevent the mobility of positioned nucleosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Scanning force microscopy of chromatin.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Nucleosome dissociation at physiological ionic strengths

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Theoretical aspects of DNA-protein interactions: co-operative and non-co-operative binding of large ligands to a one-dimensional homogeneous lattice.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Calibration of DNA curvature and a unified description of sequence-directed bending

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

DNA and protein determinants of nucleosome positioning on sea urchin 5S rRNA gene sequences in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Chromatosome positioning on assembled long chromatin. Linker histones affect nucleosome placement on 5 S rDNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

The nucleosomal core histone octamer at 3.1 A resolution: a tripartite protein assembly and a left-handed superhelix

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Energetics and affinity of the histone octamer for defined DNA sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Sequence-specific recognition of DNA in the nucleosome by pyrrole-imidazole polyamides

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Trajectory of nucleosomal linker DNA studied by fluorescence resonance energy transfer

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Accurate length determination of DNA molecules visualized by atomic force microscopy: evidence for a partial B- to A-form transition on mica.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Dinucleosomes show compaction by ionic strength, consistent with bending of linker DNA.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

DNA bending by Cro protein in specific and nonspecific complexes: implications for protein site recognition and specificity

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Boundary analysis in sedimentation transport experiments: a procedure for obtaining sedimentation coefficient distributions using the time derivative of the concentration profile

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303702

Nucleosome core particle stability and conformational change. Effect of temperature, particle and NaCl concentrations, and crosslinking of histone H3 sulfhydryl groups

28 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Nucleosomal Arrays Can Be Salt-Reconstituted on a Single-Copy MMTV Promoter DNA Template: Their Properties Differ in Several Ways from Those of Comparable 5S Concatameric Arrays

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Population analysis of subsaturated 172-12 nucleosomal arrays by atomic force microscopy detects nonrandom behavior that is favored by histone acetylation and short repeat length

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Chromatin Fiber Folding: Requirement for the Histone H4 N-terminal Tail

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

DNA at the entry-exit of the nucleosome observed by cryoelectron microscopy

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Characterization of nucleosome core particles containing histone proteins made in bacteria

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Visualization of Nucleosomal Substructure in Native Chromatin by Atomic Force Microscopy

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Binding of ethidium to the nucleosome core particle. 2. Internal and external binding modes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Scanning force microscopy of Escherichia coli RNA polymerase.sigma54 holoenzyme complexes with DNA in buffer and in air

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Sedimentation velocity spins a new weave for an old fabric

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Chromatin organization re-viewed

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Role of linker histones in extended chromatin fibre structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Evidence for nonrandom behavior in 208-12 subsaturated nucleosomal array populations analyzed by AFM

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

Mapping nucleosome locations on the 208-12 by AFM provides clear evidence for cooperativity in array occupation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974815-2

10.1016/S0006-3495(03)74815-2

7 January 2021

Identifiers

DOI

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/iranhrucr5fuxo4a2wwkpfmgn4

30 July 2022

release_iranhrucr5fuxo4a2wwkpfmgn4

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/iranhrucr5fuxo4a2wwkpfmgn4

30 July 2022

https://api.fatcat.wiki/v0/release/iranhrucr5fuxo4a2wwkpfmgn4

1 reference

30 July 2022

https://api.fatcat.wiki/v0/release/iranhrucr5fuxo4a2wwkpfmgn4

1 reference

30 July 2022