(Q34193538)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

title

MethylPurify: tumor purity deconvolution and differential methylation detection from single tumor DNA methylomes (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference

9

1 reference

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12 March 2020

Peng Jiang

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Yong Hou

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

author name string

Xiaoqi Zheng

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Qian Zhao

2

1 reference

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12 March 2020

Hua-Jun Wu

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Wei Li

4

1 reference

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12 March 2020

Haiyun Wang

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Clifford A Meyer

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Qian Alvin Qin

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Han Xu

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Fuqiang Li

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Jianxing He

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Jun Wang

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Jun Wang

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Peng Zhang

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Yong Zhang

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Xiaole Shirley Liu

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

publication date

7 August 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

volume

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

page(s)

419

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

issue

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

12 March 2020

copyright license

start time

1 August 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1186/preaccept-9737754001327268

0 references

cites work

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Inferring tumour purity and stromal and immune cell admixture from expression data

5 July 2018

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DNA hypomethylation within specific transposable element families associates with tissue-specific enhancer landscape

5 July 2018

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Computational purification of individual tumor gene expression profiles leads to significant improvements in prognostic prediction

5 July 2018

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5 July 2018

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Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data

5 July 2018

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PurityEst: estimating purity of human tumor samples using next-generation sequencing data

5 July 2018

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Absolute quantification of somatic DNA alterations in human cancer

5 July 2018

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Genomic landscape of human allele-specific DNA methylation.

5 July 2018

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Epigenetic variability in cells of normal cytology is associated with the risk of future morphological transformation

5 July 2018

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Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation in the mouse genome

5 July 2018

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Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer

5 July 2018

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Regions of focal DNA hypermethylation and long-range hypomethylation in colorectal cancer coincide with nuclear lamina-associated domains

5 July 2018

1 reference

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Increased methylation variation in epigenetic domains across cancer types

5 July 2018

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GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers

5 July 2018

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BACOM: in silico detection of genomic deletion types and correction of normal cell contamination in copy number data

5 July 2018

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Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling

5 July 2018

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Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications.

5 July 2018

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Allele-specific copy number analysis of tumors

5 July 2018

1 reference

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TumorBoost: normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays

5 July 2018

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The landscape of somatic copy-number alteration across human cancers

5 July 2018

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Genome-scale DNA methylation mapping of clinical samples at single-nucleotide resolution

5 July 2018

1 reference

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Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus

5 July 2018

1 reference

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Human DNA methylomes at base resolution show widespread epigenomic differences

5 July 2018

1 reference

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Heterogeneity in cancer: cancer stem cells versus clonal evolution

5 July 2018

1 reference

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5 July 2018

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High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing

5 July 2018

1 reference

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The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

5 July 2018

1 reference

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5 July 2018

1 reference

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5 July 2018

1 reference

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DNA methylation as a therapeutic target in cancer

5 July 2018

1 reference

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5 July 2018

1 reference

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Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis

5 July 2018

1 reference

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MGMT promoter methylation and field defect in sporadic colorectal cancer.

5 July 2018

1 reference

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DNA methylation and human disease

5 July 2018

1 reference

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Aberrant DNA methylation as a cancer-inducing mechanism

5 July 2018

1 reference

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The relationship between hypomethylation and CpG island methylation in colorectal neoplasia

5 July 2018

1 reference

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DNA methylation and genomic imprinting: insights from cancer into epigenetic mechanisms

5 July 2018

1 reference

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DNA methylation in cancer: too much, but also too little

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165374

Worms gang up on bacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165374

Allele-specific non-CpG methylation of the Nf1 gene during early mouse development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165374

Epigenetic inactivation of RASSF1A in lung and breast cancers and malignant phenotype suppression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165374

Epigenetic inactivation of a RAS association domain family protein from the lung tumour suppressor locus 3p21.3.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165374

DNA methylation: past, present and future directions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165374

Alterations in DNA methylation: a fundamental aspect of neoplasia

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165374

Role for DNA methylation in genomic imprinting

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165374

Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165374

The clonal evolution of tumor cell populations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165374

Differential variability improves the identification of cancer risk markers in DNA methylation studies profiling precursor cancer lesions.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165374

Chromosomal Instability and Tumors Promoted by DNA Hypomethylation

28 October 2018

1 reference

12 December 2020

RNA and the epigenetic regulation of X chromosome inactivation

1 reference

12 December 2020

DNA methylation and cancer

1 reference

12 December 2020

Identification of novel methylation markers in cervical cancer using restriction landmark genomic scanning

1 reference

12 December 2020

The fundamental role of epigenetic events in cancer

1 reference

12 December 2020

10.1186/PREACCEPT-9737754001327268

Identifiers

DOI

1 reference

PubMed ID

25103624

10.1186/S13059-014-0419-X

31 July 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25103624%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference