(Q34196713)

31 July 2017

title

GIST: Genomic island suite of tools for predicting genomic islands in genomic sequences (English)

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31 July 2017

author name string

Mohammad Shabbir Hasan

1

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31 July 2017

Qi Liu

2

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31 July 2017

Han Wang

3

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31 July 2017

John Fazekas

4

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31 July 2017

Bernard Chen

5

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31 July 2017

Dongsheng Che

6

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31 July 2017

publication date

28 February 2012

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31 July 2017

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31 July 2017

volume

8

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31 July 2017

issue

4

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31 July 2017

page(s)

203-205

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EGID: an ensemble algorithm for improved genomic island detection in genomic sequences

31 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

Classification of genomic islands using decision trees and their ensemble algorithms

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

Detecting genomic islands using bioinformatics approaches

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

Evaluation of genomic island predictors using a comparative genomics approach

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

A new computational method for the detection of horizontal gene transfer events

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

Pathogenicity islands in bacterial pathogenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

Pathogenicity islands and the evolution of microbes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

Amelioration of bacterial genomes: rates of change and exchange

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

INDeGenIUS, a new method for high-throughput identification of specialized functional islands in completely sequenced organisms

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

IslandPath: aiding detection of genomic islands in prokaryotes

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

Codon usages in different gene classes of the Escherichia coli genome.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3302003

Detecting pathogenicity islands and anomalous gene clusters by iterative discriminant analysis

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22419842

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.6026/97320630008203

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31 July 2017

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31 July 2017

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