(Q34246786)

31 July 2017

title

Use of structural phylogenetic networks for classification of the ferritin-like superfamily (English)

1 reference

31 July 2017

1 reference

Daniel Lundin

1

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Martin Högbom

object named as

Martin Högbom

series ordinal

4

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Britt-Marie Sjöberg

object named as

Britt-Marie Sjöberg

series ordinal

3

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author name string

Anthony M Poole

series ordinal

2

1 reference

31 July 2017

language of work or name

English

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publication date

25 April 2012

1 reference

Journal of Biological Chemistry

31 July 2017

published in

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31 July 2017

volume

287

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31 July 2017

issue

24

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31 July 2017

page(s)

20565-20575

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Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies

31 July 2017

cites work

1 reference

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Characterization of the Bacteroides fragilis bfr Gene Product Identifies a Bacterial DPS-Like Protein and Suggests Evolutionary Links in the Ferritin Superfamily

6 July 2018

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Cyanobacterial alkane biosynthesis further expands the catalytic repertoire of the ferritin-like 'di-iron-carboxylate' proteins

6 July 2018

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Detection of formate, rather than carbon monoxide, as the stoichiometric coproduct in conversion of fatty aldehydes to alkanes by a cyanobacterial aldehyde decarbonylase

6 July 2018

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Metal use in ribonucleotide reductase R2, di-iron, di-manganese and heterodinuclear--an intricate bioinorganic workaround to use different metals for the same reaction

6 July 2018

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Ribonucleotide reduction - horizontal transfer of a required function spans all three domains

6 July 2018

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Structural Basis for Activation of Class Ib Ribonucleotide Reductase

6 July 2018

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6 July 2018

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The Ferritin-like superfamily: Evolution of the biological iron storeman from a rubrerythrin-like ancestor.

6 July 2018

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The multifaceted capacity of Dps proteins to combat bacterial stress conditions: Detoxification of iron and hydrogen peroxide and DNA binding

6 July 2018

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An active dimanganese(III)-tyrosyl radical cofactor in Escherichia coli class Ib ribonucleotide reductase.

6 July 2018

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RNRdb, a curated database of the universal enzyme family ribonucleotide reductase, reveals a high level of misannotation in sequences deposited to Genbank

6 July 2018

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6 July 2018

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Exploration of uncharted regions of the protein universe

6 July 2018

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Binding of Pseudomonas aeruginosa apobacterioferritin-associated ferredoxin to bacterioferritin B promotes heme mediation of electron delivery and mobilization of core mineral iron

6 July 2018

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6 July 2018

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Desaturases: emerging models for understanding functional diversification of diiron-containing enzymes

6 July 2018

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A Mycobacterium tuberculosis ligand-binding Mn/Fe protein reveals a new cofactor in a remodeled R2-protein scaffold

6 July 2018

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Dendroscope: An interactive viewer for large phylogenetic trees

6 July 2018

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The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

6 July 2018

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The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution

6 July 2018

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Constraints in naming parts of the Tree of Life

6 July 2018

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Structure of the DPS-like protein from Sulfolobus solfataricus reveals a bacterioferritin-like dimetal binding site within a DPS-like dodecameric assembly

6 July 2018

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Ribonucleotide reductases

6 July 2018

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Application of phylogenetic networks in evolutionary studies

6 July 2018

1 reference

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Structure-based phylogeny of the metallo-beta-lactamases

6 July 2018

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X-ray structure of putative acyl-ACP desaturase DesA2 from Mycobacterium tuberculosis H37Rv

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Iron and hydrogen peroxide detoxification properties of DNA-binding protein from starved cells. A ferritin-like DNA-binding protein of Escherichia coli.

6 July 2018

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Structure-based phylogenetic analysis of short-chain alcohol dehydrogenases and reclassification of the 17beta-hydroxysteroid dehydrogenase family

6 July 2018

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Dioxygen Activation and Methane Hydroxylation by Soluble Methane Monooxygenase: A Tale of Two Irons and Three Proteins A list of abbreviations can be found in Section 7.

6 July 2018

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Twilight zone of protein sequence alignments

6 July 2018

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BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data

6 July 2018

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Di-iron-carboxylate proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3370241

SCOP: a structural classification of proteins database for the investigation of sequences and structures

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3370241

A review of long-branch attraction

6 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.367458

Mathematical elegance with biochemical realism: the covarion model of molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.367458

The unusual intersubunit ferroxidase center of Listeria innocua Dps is required for hydrogen peroxide detoxification but not for iron uptake. A study with site-specific mutants

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M112.367458

Biochemistry. A never-ending story.

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M112.367458

The manganese/iron-carboxylate proteins: what is what, where are they, and what can the sequences tell us?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.367458

Structure is three to ten times more conserved than sequence-A study of structural response in protein cores

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.367458

Phylogeny of the restriction endonuclease-like superfamily inferred from comparison of protein structures

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3370241

Of clades and clans: terms for phylogenetic relationships in unrooted trees

28 October 2018

1 reference

12 December 2020

Location of haem in bacterioferritin of E. coli

1 reference

12 December 2020

A novel non-heme iron-binding ferritin related to the DNA-binding proteins of the Dps family in Listeria innocua

1 reference

12 December 2020

Iron storage in bacteria

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M112.367458

1 reference

31 July 2017

1 reference

31 July 2017

1 reference